Escherichia coli ExPEC_A456 |
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Putative Escherichia coli ExPEC_A456 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 38134
| Sequence length: | GenBank #: | |
| Chromosome: | 4,968,152 bp | CP142538 |
| plasmid pA456_p0: | 119,871 bp | CP142539 |
REBASE acronym: EcoA456
Org_num: 74051
All begin SNB44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2385 | endoribonuclease SymE | |||
| 2390 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoA456ORF2395P |
| 2395 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoA456ORF2395P |
| 2400 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoA456ORF2395P |
| 2405 | 322 aa hypothetical protein | |||
| 8305 | IS3-like element IS600 family transposase | |||
| 8310 | S | S2.EcoMEC0001ORF18360P (100% identity) | S2.EcoA456ORF8335P | |
| 8315 | R | Sbo49812IP (99% identity) | EcoA456ORF8335P | |
| 8320 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 8325 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 8330 | S | S.Ecos2020ORFCP (100% identity) | YTCANNNNNNGTTY | S1.EcoA456ORF8335P |
| 8335 | M | M.EcosE2ORF13465P (100% identity) | M.EcoA456ORF8335P | |
| 8340 | transcription factor | |||
| 19710 | transposase | |||
| 19715 | R | SenSI167ORF3215P (100% identity) | EcoA456ORF19730P | |
| 19720 | DUF4268 domain-containing protein | |||
| 19725 | S | S.SenSI167ORF3215P (100% identity) | S.EcoA456ORF19730P | |
| 19730 | M | M.SenSI167ORF3215P (100% identity) | M.EcoA456ORF19730P | |
| 19735 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2170 | AAA family ATPase | |||
| 2175 | R | SflN101ORF11875P (100% identity) | EcoA456ORF2175P | |
| 2180 | HNH endonuclease | |||
| 2660 | PerC family transcriptional regulator | |||
| 2665 | M | M.Ecosa15ORFHP (99% identity) | GATC | M.EcoA456ORF2665P |
| 2670 | LexA family transcriptional regulator | |||
| 13230 | drug/metabolite exporter YedA | |||
| 13235 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoA456DcmP |
| 13240 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoA456DcmP |
| 13245 | phosphohydrolase | |||
| 21380 | ribulose-phosphate 3-epimerase | |||
| 21385 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA456DamP |
| 21390 | cell division protein DamX | |||
| plasmid pA456_p0 | ||||
| 24855 | 73 aa hypothetical protein | |||
| 24860 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoA456ORF24860P |
| 24865 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2160 | integrase arm-type DNA-binding domain-containing | |||
| 2165 | R | SflN101McrCP (100% identity) | EcoA456McrCP | |
| 2170 | R | SflN101McrBP (100% identity) | EcoA456McrBP | |
| 2175 | HNH endonuclease | |||
| 2370 | DUF1127 domain-containing protein | |||
| 2375 | R | SflLIN8GmrSDP (42% identity) | EcoA456GmrSP | |
| 2380 | R | Ecos673GmrDP (100% identity) | EcoA456GmrDP | |
| 2385 | endoribonuclease SymE | |||