Ligilactobacillus murinus PC39 |
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Putative Ligilactobacillus murinus PC39 RM systems
Ref: Lubin,J.B. et al. Cell Host Microbe (2023) In press
REBASE ref # 38110
Complete sequence: 2,482,780 bp
GenBank #: CP121161
REBASE acronym: LmuPC39
Org_num: 74140
All begin P8F80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5145 | 61 aa hypothetical protein | |||
| 5150 | M | N-6 DNA methylase | M.LmuPC39ORF5150P | |
| 5155 | 65 aa hypothetical protein | |||
| 7285 | IS30 family transposase | |||
| 7290 | S | S1.LmuASF361ORF751P (52% identity) | S4.LmuPC39ORF7320P | |
| 7295 | S | S2.LmuASF361ORF751P (100% identity) | S3.LmuPC39ORF7320P | |
| 7300 | Abi family protein | |||
| 7305 | tyrosine-type recombinase/integrase | |||
| 7310 | S | S3.Lmu147ORF2310P (100% identity) | S2.LmuPC39ORF7320P | |
| 7315 | S | S3.LmuASF361ORF751P (55% identity) | S1.LmuPC39ORF7320P | |
| 7320 | M | M.LmuASF361ORF751P (95% identity) | M.LmuPC39ORF7320P | |
| 7325 | R | Lmu147ORF2310P (80% identity) | LmuPC39ORF7320P | |
| 7330 | IS256 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7445 | antirestriction protein ArdA | |||
| 7450 | RM | LmuV10ORF10660P (99% identity) | LmuPC39ORF7450P | |
| 7455 | S | S.LmuV10ORF10660P (96% identity) | S.LmuPC39ORF7450P | |
| 7460 | SEC10/PgrA surface exclusion domain-containing | |||
| 11090 | glutamine-hydrolyzing GMP synthase | |||
| 11095 | RM | Lfa0062ORF4710P (97% identity) | LmuPC39ORF11095P | |
| 11100 | type II CAAX endopeptidase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2455 | (deoxy)nucleoside triphosphate | |||
| 2460 | R | Lmu361ORF2006P (99% identity) | LmuPC39ORF2460P | |
| 2465 | IMP dehydrogenase | |||