Escherichia coli ExPEC_A163 |
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Putative Escherichia coli ExPEC_A163 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 38134
| Sequence length: | GenBank #: | |
| Chromosome: | 4,969,825 bp | CP142576 |
| plasmid pA163_p0: | 237,195 bp | CP142577 |
| plasmid pA163_p1: | 76,809 bp | CP142578 |
| plasmid pA163_p2: | 100,127 bp | CP142579 |
REBASE acronym: EcoA163
Org_num: 74037
All begin SNA06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1570 | 128 aa hypothetical protein | |||
| 1575 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.EcoA163ORF1575P |
| 1580 | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.EcoA163ORF1575P |
| 1585 | 428 aa hypothetical protein | |||
| plasmid pA163_p0 | ||||
| 24680 | type II toxin-antitoxin system Phd/YefM family | |||
| 24685 | M | M.SspS13ORF175P (99% identity) | M.EcoA163ORF24685P | |
| 24690 | S | S.SspS13ORF175P (100% identity) | S.EcoA163ORF24685P | |
| 24695 | R | KpnLL83ORF1P (100% identity) | EcoA163ORF24685P | |
| 24700 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1550 | HNH endonuclease | |||
| 1555 | R | EcosC41ORF5230P (100% identity) | EcoA163ORF1555P | |
| 1560 | AAA family ATPase | |||
| 1870 | osmoprotectant transport activator ProQ | |||
| 1875 | M | M.SflFF24DndBP (100% identity) | M.EcoA163DndBP | |
| 1880 | DNA phosphorothioation system sulfurtransferase | |||
| 1875 | DNA sulfur modification protein DndB | |||
| 1880 | M | M.SflFF24DndCP (100% identity) | M.EcoA163DndCP | |
| 1885 | DNA sulfur modification protein DndD | |||
| 1880 | DNA phosphorothioation system sulfurtransferase | |||
| 1885 | M | M.Econumer3DndDP (100% identity) | M.EcoA163DndDP | |
| 1890 | DNA sulfur modification protein DndE | |||
| 1885 | DNA sulfur modification protein DndD | |||
| 1890 | M | M.SflFF24DndEP (100% identity) | M.EcoA163DndEP | |
| 1895 | DGQHR domain-containing protein | |||
| 1905 | accessory gene regulator B family protein | |||
| 1910 | R | EcosEC5DptHP (100% identity) | EcoA163DptHP | |
| 1915 | DNA phosphorothioation-dependent restriction | |||
| 1910 | DNA phosphorothioation-dependent restriction | |||
| 1915 | R | SflFF24DptGP (100% identity) | EcoA163DptGP | |
| 1920 | DNA phosphorothioation-dependent restriction | |||
| 1915 | DNA phosphorothioation-dependent restriction | |||
| 1920 | R | SflFF24DptFP (100% identity) | EcoA163DptFP | |
| 1925 | integrase | |||
| 3405 | LexA family transcriptional regulator | |||
| 3410 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoA163ORF3410P |
| 3415 | PerC family transcriptional regulator | |||
| 7200 | cell division protein DamX | |||
| 7205 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA163DamP |
| 7210 | ribulose-phosphate 3-epimerase | |||
| 11665 | Com family DNA-binding transcriptional | |||
| 11670 | M | M.SenYU39ORF1896P (100% identity) | M.EcoA163ORF11670P | |
| 11675 | ribosome-associated translation inhibitor RaiA | |||
| 12970 | recombination protein NinB | |||
| 12975 | M | M.EcosB7AORFBP (99% identity) | GATC | M.EcoA163ORF12975P |
| 12980 | phosphoadenosine phosphosulfate reductase family | |||
| 15120 | phosphohydrolase | |||
| 15125 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoA163DcmP |
| 15130 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoA163DcmP |
| 15135 | drug/metabolite exporter YedA | |||
| plasmid pA163_p0 | ||||
| 25640 | IS91 family transposase | |||
| 25645 | M | M.EcoAH25ORF25285P (97% identity) | M.EcoA163ORF25645P | |
| 25650 | recombination-associated protein RdgC | |||
| plasmid pA163_p1 | ||||
| 26085 | 73 aa hypothetical protein | |||
| 26090 | M | M.Xca80ORFEP (100% identity) | M.EcoA163ORF26090P | |
| 26095 | 75 aa hypothetical protein | |||
| plasmid pA163_p2 | ||||
| 26580 | 73 aa hypothetical protein | |||
| 26585 | M | M.StyR64ORFAP (100% identity) | M.EcoA163ORF26585P | |
| 26590 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1555 | HNH endonuclease | |||
| 1560 | R | SflN101McrBP (100% identity) | EcoA163McrBP | |
| 1565 | R | Ecows53McrCP (100% identity) | EcoA163McrCP | |
| 1570 | 128 aa hypothetical protein | |||