Escherichia coli ExPEC_A338 |
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Putative Escherichia coli ExPEC_A338 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 38134
| Sequence length: | GenBank #: | |
| Chromosome: | 4,797,361 bp | CP142559 |
| plasmid pA338_p0: | 101,386 bp | CP142560 |
| plasmid pA338_p2: | 96,916 bp | CP142562 |
REBASE acronym: EcoA338
Org_num: 74044
All begin SNB72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17140 | integrase core domain-containing protein | |||
| 17145 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoA338ORF17145P |
| 17150 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoA338ORF17145P |
| 17155 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoA338ORF17145P |
| 17160 | IS1 family transposase | |||
| plasmid pA338_p0 | ||||
| 23950 | type II toxin-antitoxin system Phd/YefM family | |||
| 23955 | M | M.EcoLH09aORF24620P (100% identity) | M.EcoA338ORF23955P | |
| 23960 | S | S.EcoLH09aORF24620P (99% identity) | S.EcoA338ORF23955P | |
| 23965 | R | EcoLH09aORF24620P (100% identity) | EcoA338ORF23955P | |
| 23970 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6015 | TrmB family transcriptional regulator | |||
| 6020 | M | M.EcosE1ORFAP (100% identity) | M.EcoA338ORF6020P | |
| 6025 | 63 aa hypothetical protein | |||
| 13475 | drug/metabolite exporter YedA | |||
| 13480 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoA338DcmP |
| 13485 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoA338DcmP |
| 13490 | phosphohydrolase | |||
| 16745 | ribosome-associated translation inhibitor RaiA | |||
| 16750 | M | M.SenYU39ORF1896P (100% identity) | M.EcoA338ORF16750P | |
| 16755 | Com family DNA-binding transcriptional | |||
| 20930 | ribulose-phosphate 3-epimerase | |||
| 20935 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA338DamP |
| 20940 | cell division protein DamX | |||
| plasmid pA338_p0 | ||||
| 23535 | RNA-guided endonuclease TnpB family protein | |||
| 23540 | M | M.EcoCCORF44530P (100% identity) | M.EcoA338ORF23540P | |
| 23545 | recombination-associated protein RdgC | |||
| plasmid pA338_p2 | ||||
| 25270 | 73 aa hypothetical protein | |||
| 25275 | M | M.StyR64ORFAP (100% identity) | M.EcoA338ORF25275P | |
| 25280 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pA338_p0 | ||||
| 23870 | modulator protein | |||
| 23875 | M | M.SenSL0052ORF25975P (100% identity) | AGACC | M.EcoA338ORF23875P |
| 23880 | R | SenSL0052ORF25975P (100% identity) | AGACC | EcoA338ORF23875P |
| 23885 | maturation control protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9450 | recombinase family protein | |||
| 9455 | R | EcoteDMcrBP (100% identity) | EcoA338McrBP | |
| 9460 | R | EmaE2C08McrCP (100% identity) | EcoA338McrCP | |
| 9465 | isocitrate/isopropylmalate family dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4620 | PerC family transcriptional regulator | |||
| 4625 | M | M.EcoBE127ORF13555P (100% identity) | GATC | M.EcoA338ORF4625P |
| 4630 | LexA family transcriptional regulator | |||
| 7880 | TraR/DksA family transcriptional regulator | |||
| 7885 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoA338ORF7885P |
| 7890 | replication endonuclease | |||