Escherichia coli ECO-104 |
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Putative Escherichia coli ECO-104 RM systems
Ref: Zhao,S. and Kang,H. unpublished
REBASE ref # 38133
| Sequence length: | GenBank #: | |
| Chromosome: | 4,799,433 bp | CP141581 |
| plasmid p-1: | 160,236 bp | CP141582 |
| plasmid p-2: | 111,954 bp | CP141583 |
| plasmid p-3: | 95,917 bp | CP141584 |
REBASE acronym: EcoO104
Org_num: 74036
All begin U3O62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9155 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoO104ORF9155P |
| 9160 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoO104ORF9155P |
| 9165 | restriction system-associated AAA family ATPase | |||
| plasmid p-1 | ||||
| 23935 | chromosome segregation protein SMC | |||
| 23940 | M | M.SenS1545ORF24780P (100% identity) | M.EcoO104ORF23940P | |
| 23945 | R | SenS1545ORF24780P (100% identity) | EcoO104ORF23940P | |
| 23950 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoO104DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 9440 | phosphohydrolase | |||
| 9445 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoO104DcmP |
| 9450 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoO104DcmP |
| 9455 | drug/metabolite exporter YedA | |||
| 19750 | HNH endonuclease | |||
| 19755 | R | Sso8ORF19860P (100% identity) | EcoO104ORF19755P | |
| 19760 | 55 aa hypothetical protein | |||
| plasmid p-3 | ||||
| 24860 | 103 aa hypothetical protein | |||
| 24865 | M | M.SenST46ORF25580P (100% identity) | M.EcoO104ORF24865P | |
| 24870 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p-2 | ||||
| 24405 | 76 aa hypothetical protein | |||
| 24410 | M | M.Sso524ORF460P (100% identity) | GATC | M.EcoO104ORF24410P |
| 24415 | 269 aa hypothetical protein | |||