Escherichia coli BHD6 |
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Putative Escherichia coli BHD6 RM systems
Ref: Yang,J. et al. unpublished
REBASE ref # 38057
| Sequence length: | GenBank #: | |
| Chromosome: | 4,593,421 bp | CP141791 |
| plasmid pfosA3: | 76,461 bp | CP141794 |
| plasmid pqnrS: | 119,424 bp | CP141792 |
| plasmid unnamed: | 106,227 bp | CP141793 |
REBASE acronym: EcoBHD6
Org_num: 73846
All begin VB057_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9055 | 410 aa hypothetical protein | |||
| 9060 | M | M.EcoNT1F31ORF10715P (100% identity) | GATGNNNNNNTGC | M.EcoBHD6ORF9060P |
| 9065 | S | S.Kqu1124ORF26120P (98% identity) | GATGNNNNNNTGC | S.EcoBHD6ORF9060P |
| 9070 | YecA family protein | |||
| 9075 | R | EcoGS04ORF3840P (100% identity) | GATGNNNNNNTGC | EcoBHD6ORF9060P |
| 9080 | SprT family zinc-dependent metalloprotease | |||
| plasmid pfosA3 | ||||
| 24070 | 62 aa hypothetical protein | |||
| 24075 | R | SenS1545ORF24780P (100% identity) | EcoBHD6ORF24080P | |
| 24080 | M | M.SenS1545ORF24780P (100% identity) | M.EcoBHD6ORF24080P | |
| 24085 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1680 | cell division protein DamX | |||
| 1685 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoBHD6DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoBHD6ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 6590 | recombination protein NinB | |||
| 6595 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoBHD6ORF6595P |
| 6600 | NinE family protein | |||
| 8740 | phosphohydrolase | |||
| 8745 | M | M.EcoGS04DcmP (100% identity) | CCWGG | M.EcoBHD6DcmP |
| 8750 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoBHD6DcmP |
| 8755 | drug/metabolite exporter YedA | |||
| 10935 | DUF977 family protein | |||
| 10940 | M | M.Ecoi029ORF11125P (100% identity) | M.EcoBHD6ORF10940P | |
| 10945 | 60 aa hypothetical protein | |||
| 19540 | HNH endonuclease | |||
| 19545 | R | EcoW619ORFAP (96% identity) | EcoBHD6ORF19545P | |
| 19550 | 100 aa hypothetical protein | |||
| plasmid pfosA3 | ||||
| 24230 | 97 aa hypothetical protein | |||
| 24235 | M | M.Xca80ORFEP (100% identity) | M.EcoBHD6ORF24235P | |
| 24240 | 73 aa hypothetical protein | |||
| plasmid pqnrS | ||||
| 23160 | IS1 family transposase | |||
| 23165 | R | EcoSF10ORF2015P (100% identity) | GCWGC | EcoBHD6ORF23165P |
| 23170 | XRE family transcriptional regulator | |||
| plasmid unnamed | ||||
| 23670 | 290 aa hypothetical protein | |||
| 23675 | M | M.Ecosa7ORFDP (100% identity) | M.EcoBHD6ORF23675P | |
| 23680 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19550 | 100 aa hypothetical protein | |||
| 19555 | R | Ecos19ORF20250P (100% identity) | EcoBHD6ORF19560P | |
| 19560 | M | M.EcoXH990ORF24545P (100% identity) | M.EcoBHD6ORF19560P | |
| 19565 | SNF2-related protein | |||