Escherichia coli 673 |
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Putative Escherichia coli 673 RM systems
Ref: Lin,X. unpublished
REBASE ref # 31708
| Sequence length: | GenBank #: | |
| Chromosome: | 4,883,406 bp | CP141196 |
| plasmid pEc673-2: | 122,231 bp | CP141198 |
| plasmid pEc673-3: | 214,402 bp | CP141199 |
REBASE acronym: Ecos673
Org_num: 73845
All begin U3938_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21220 | transposase | |||
| 21225 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Ecos673ORF21230P |
| 21230 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Ecos673ORF21230P |
| 21235 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Ecos673ORF21230P |
| 21240 | AAA family ATPase | |||
| plasmid pEc673-2 | ||||
| 24585 | chromosome segregation protein SMC | |||
| 24590 | M | M.SenS1545ORF24780P (100% identity) | M.Ecos673ORF24590P | |
| 24595 | R | SenS1545ORF24780P (100% identity) | Ecos673ORF24590P | |
| 24600 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9660 | drug/metabolite exporter YedA | |||
| 9665 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.Ecos673DcmP |
| 9670 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Ecos673DcmP |
| 9675 | phosphohydrolase | |||
| 16395 | DNA-binding transcriptional regulator Fis | |||
| 16400 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.Ecos673ORF16400P |
| 16405 | DUF2556 family protein | |||
| 16950 | ribulose-phosphate 3-epimerase | |||
| 16955 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecos673DamP |
| 16960 | cell division protein DamX | |||
| plasmid pEc673-2 | ||||
| 24185 | 73 aa hypothetical protein | |||
| 24190 | M | M.SenRORF25115P (99% identity) | M.Ecos673ORF24190P | |
| 24195 | 97 aa hypothetical protein | |||
| plasmid pEc673-3 | ||||
| 25010 | 55 aa hypothetical protein | |||
| 25015 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ecos673ORF25015P |
| 25020 | thermonuclease family protein | |||
| 25420 | 48 aa hypothetical protein | |||
| 25425 | M | M.YpsF1ORFBP (100% identity) | M.Ecos673ORF25425P | |
| 25430 | 202 aa hypothetical protein | |||
| 25535 | DNA-binding protein | |||
| 25540 | M | M.YpsF1ORFDP (95% identity) | M.Ecos673ORF25540P | |
| 25545 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22265 | DUF1127 domain-containing protein | |||
| 22270 | R | SflLIN8GmrSDP (42% identity) | Ecos673GmrSP | |
| 22275 | R | EcofEC1GmrDP (100% identity) | Ecos673GmrDP | |
| 22280 | endoribonuclease SymE | |||