Lacticaseibacillus rhamnosus S154-24W |
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Putative Lacticaseibacillus rhamnosus S154-24W RM systems
Ref: Tran,T.D. unpublished
REBASE ref # 36465
Complete sequence: 2,952,009 bp
GenBank #: CP141328
REBASE acronym: LrhW
Org_num: 73876
All begin UHQ56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10350 | 144 aa hypothetical protein | |||
| 10355 | R | PacJQII5ORF7470P (86% identity) | LrhWORF10370P | |
| 10360 | 150 aa hypothetical protein | |||
| 10365 | S | S1.LsaL28ORF2505P (78% identity) | S.LrhWORF10370P | |
| ??? | M | M.PacPMC65ORF7295P (99% identity) | M.LrhWORF10370P | |
| 10380 | C | C.Pac202ORF7245P (100% identity) | C.LrhWORF10370P | |
| 10385 | DEAD/DEAH box helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5540 | BREX system P-loop protein BrxC | |||
| 5545 | RM | RM2.LrhSN211ORF9815P (99% identity) | LrhWORF5545P | |
| 5550 | tyrosine-type recombinase/integrase | |||
| 5550 | tyrosine-type recombinase/integrase | |||
| 5555 | RM | RM1.LrhSN211ORF9815P (99% identity) | LrhWORF5555P | |
| 5560 | BREX-1 system phosphatase PglZ type A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10300 | MFS transporter | |||
| 10305 | R | LrhSN211ORF5125P (99% identity) | LrhWORF10310P | |
| 10310 | M | M.LrhWQ2ORF2900P (51% identity) | M.LrhWORF10310BP | |
| 10315 | IS5-like element ISLrh2 family transposase | |||
| 10320 | M | M.LrhWQ2ORF2900P (38% identity) | M.LrhWORF10310AP | |
| 10325 | IS5-like element ISLrh2 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5565 | protease Lon-related BREX system protein BrxL | |||
| 5570 | R | LrhSN211GmrSDP (100% identity) | LrhWGmrSDP | |
| 5575 | 268 aa hypothetical protein | |||