Limosilactobacillus reuteri C501 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Limosilactobacillus reuteri C501 RM systems
Ref: Wang,C. et al. Food Funct (2023) In press
REBASE ref # 38068
| Sequence length: | GenBank #: | |
| Chromosome: | 2,092,193 bp | CP128357 |
| plasmid unnamed2: | 44,965 bp | CP128359 |
REBASE acronym: LreC501
Org_num: 73887
All begin QM199_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15 | SprT family protein | |||
| 25 | R | LreC501ORF10350P (100% identity) | LreC501ORF30P | |
| 30 | M | M.LreKCA2ORF1570P (99% identity) | M.LreC501ORF30P | |
| 35 | S | S1.LreC501ORF10350P (100% identity) | S1.LreC501ORF30P | |
| 40 | S | S2.LreC501ORF10350P (100% identity) | S2.LreC501ORF30P | |
| 45 | S | S3.LreC501ORF10350P (100% identity) | S3.LreC501ORF30P | |
| 50 | glycoside hydrolase family 2 TIM barrel-domain | |||
| 9545 | 62 aa hypothetical protein | |||
| 9550 | R | Lre2ORF870P (100% identity) | LreC501ORF9555P | |
| 9555 | M | M.Lre2ORF870P (100% identity) | M.LreC501ORF9555P | |
| 9560 | S | S.Lre2ORF870P (100% identity) | S.LreC501ORF9555P | |
| 9565 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5870 | AbiH family protein | |||
| 5875 | R | R1.Lre2ORF7455P (100% identity) | R1.LreC501ORF5885P | |
| 5880 | R | R2.Lre2ORF7455P (100% identity) | R2.LreC501ORF5885P | |
| 5885 | M | M1.Lre2ORF7455P (100% identity) | M1.LreC501ORF5885P | |
| 5890 | M | M2.Lre2ORF7455P (100% identity) | M2.LreC501ORF5885P | |
| 5895 | C | C.Lre2ORF7455P (100% identity) | C.LreC501ORF5885P | |
| 5900 | DEAD/DEAH box helicase | |||
| 5970 | P27 family phage terminase small subunit | |||
| 5975 | M | M.PacBCC1ORF7745P (100% identity) | M.LreC501ORF5975P | |
| 5980 | 206 aa hypothetical protein | |||
| 9855 | nucleoside-diphosphate kinase | |||
| 9860 | M | M.Lre2ORF1165P (100% identity) | TTTAAA | M.LreC501ORF9860P |
| 9865 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 10605 | recombinase family protein | |||
| 10610 | M | M.Lre384ORF11075P (100% identity) | M.LreC501ORF10720P | |
| 10615 | R | Lre2ORF10255P (100% identity) | LreC501ORF10720P | |
| 10620 | P-loop NTPase fold protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9680 | phosphatase PAP2 family protein | |||
| 9685 | R | Lre2ORF1000P (100% identity) | LreC501ORF9685P | |
| 9690 | 44 aa hypothetical protein | |||