Escherichia coli KE58 |
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Putative Escherichia coli KE58 RM systems
Ref: Hogins,J. et al. unpublished
REBASE ref # 37990
Complete sequence: 4,743,726 bp
GenBank #: CP141075
REBASE acronym: EcoKE58
Org_num: 73585
All begin U8P21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19605 | adenine/cytosine-specific restriction | |||
| 19610 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | EcoKE58ORF19615P |
| 19615 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.EcoKE58ORF19615P |
| 19620 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.EcoKE58ORF19615P |
| 19625 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoKE58DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoKE58ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 5460 | TraR/DksA family transcriptional regulator | |||
| 5465 | M | M.SenSE01ORF5810P (100% identity) | GATC | M.EcoKE58ORF5465P |
| 5470 | replication endonuclease | |||
| 9240 | phosphohydrolase | |||
| 9245 | M | M.EcoS43DcmP (100% identity) | CCWGG | M.EcoKE58DcmP |
| 9250 | V | V.EcoSFE8DcmP (100% identity) | V.EcoKE58DcmP | |
| 9255 | drug/metabolite exporter YedA | |||
| 11265 | DUF977 family protein | |||
| 11270 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoKE58ORF11270P | |
| 11275 | 60 aa hypothetical protein | |||
| 13615 | LexA family transcriptional regulator | |||
| 13620 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoKE58ORF13620P |
| 13625 | PerC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13415 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13420 | R | EfeEF02ORF213200P (100% identity) | YCGR | EcoKE58ORF13420P |
| 13425 | site-specific DNA recombinase | |||