Escherichia coli PNUSAE151638 |
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Putative Escherichia coli PNUSAE151638 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 5,458,848 bp | CP140516 |
| plasmid unnamed1: | 92,735 bp | CP140517 |
REBASE acronym: Eco638
Org_num: 73591
All begin U4W39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23935 | DUF262 domain-containing protein | |||
| 23940 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco638ORF23945P |
| 23945 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco638ORF23945P |
| 23950 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco638ORF23945P |
| 23955 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2080 | cell division protein DamX | |||
| 2085 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco638DamP |
| 2090 | ribulose-phosphate 3-epimerase | |||
| 2595 | DUF2556 family protein | |||
| 2600 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco638ORF2600P |
| 2605 | DNA-binding transcriptional regulator Fis | |||
| 8560 | recombination protein NinB | |||
| 8565 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco638ORF8565P |
| 8570 | NinE family protein | |||
| 9955 | phosphohydrolase | |||
| 9960 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco638DcmP |
| 9965 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco638DcmP |
| 9970 | drug/metabolite exporter YedA | |||
| 14660 | DUF6645 domain-containing protein | |||
| 14675 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco638ORF14675P | |
| 14680 | TrmB family transcriptional regulator | |||
| 17585 | NinE family protein | |||
| 17590 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco638ORF17590P |
| 17595 | recombination protein NinB | |||
| 24170 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco638ORF24170P |
| 24175 | DEAD/DEAH box helicase | |||
| 24205 | N-acetylneuraminic acid mutarotase | |||
| 24210 | R | Ecos1613ORF26795P (100% identity) | Eco638ORF24210P | |
| 24215 | transposase | |||
| plasmid unnamed1 | ||||
| 27420 | 101 aa hypothetical protein | |||
| 27425 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco638ORF27425P | |
| 27430 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23955 | endoribonuclease SymE | |||
| 23960 | R | EcosPA8GmrSDP (55% identity) | Eco638GmrDP | |
| 23965 | R | Ecos1613GmrSP (100% identity) | Eco638GmrSP | |
| 23970 | cytoplasmic protein | |||