Escherichia coli FLI21 |
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Putative Escherichia coli FLI21 RM systems
Ref: Braun,S.D. unpublished
REBASE ref # 33101
| Sequence length: | GenBank #: | |
| Chromosome: | 4,739,347 bp | CP139808 |
| plasmid pFLI21_1: | 111,202 bp | CP139810 |
| plasmid pFLI21_4: | 232,487 bp | CP139813 |
REBASE acronym: EcoFLI21
Org_num: 73574
All begin U0532_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9195 | adenine/cytosine-specific restriction | |||
| 9200 | R | EcoH58ORFEP (100% identity) | EcoFLI21ORF9210P | |
| 9205 | IS1 family transposase | |||
| 9210 | M | M.EcoH58ORFEP (99% identity) | M.EcoFLI21ORF9210P | |
| 9215 | 65 aa hypothetical protein | |||
| 16060 | IS21-like element IS100 family transposase | |||
| 16065 | M | M.Kpnb12LORF3305P (100% identity) | M.EcoFLI21ORF16065P | |
| 16070 | transposase | |||
| 16085 | 63 aa hypothetical protein | |||
| 16090 | R | EcosEC71ORF17675P (100% identity) | EcoFLI21ORF16100P | |
| 16095 | S | S.EcoF33ORF3660P (100% identity) | S.EcoFLI21ORF16100P | |
| 16100 | M | M.Eco7421ORF3395P (100% identity) | M.EcoFLI21ORF16100P | |
| 16105 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9410 | 5-nucleotidase | |||
| 9415 | R | EcoH58ORFFP (100% identity) | GAAC | EcoFLI21ORF9415P |
| 9420 | integrase arm-type DNA-binding domain-containing | |||
| 14260 | cell division protein DamX | |||
| 14265 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoFLI21DamP |
| 14270 | ribulose-phosphate 3-epimerase | |||
| 14900 | DUF2556 family protein | |||
| 14905 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoFLI21ORF14905P |
| 14910 | DNA-binding transcriptional regulator Fis | |||
| 18340 | TraR/DksA family transcriptional regulator | |||
| 18345 | M | M.Eco16424ORF5585P (100% identity) | GATC | M.EcoFLI21ORF18345P |
| 18350 | replication endonuclease | |||
| 22095 | phosphohydrolase | |||
| 22100 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoFLI21DcmP |
| 22105 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoFLI21DcmP |
| 22110 | drug/metabolite exporter YedA | |||
| 22245 | TraR/DksA family transcriptional regulator | |||
| 22250 | M | M.EclBTORFAP (93% identity) | M.EcoFLI21ORF22250P | |
| 22255 | MT-A70 family methyltransferase | |||
| 22250 | DNA cytosine methyltransferase | |||
| 22255 | M | M.Eas61ORF19600P (70% identity) | M.EcoFLI21ORF22255P | |
| 22260 | DUF1317 family protein | |||
| plasmid pFLI21_1 | ||||
| 23700 | helix-turn-helix transcriptional regulator | |||
| 23705 | R | EcoUKORF4603P (100% identity) | GCWGC | EcoFLI21ORF23705P |
| 23710 | IS1 family transposase | |||
| plasmid pFLI21_4 | ||||
| 25020 | DNA-binding protein | |||
| 25025 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoFLI21ORF25025P |
| 25030 | 284 aa hypothetical protein | |||
| 25575 | 55 aa hypothetical protein | |||
| 25580 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoFLI21ORF25580P |
| 25585 | thermonuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9190 | GTPase | |||
| 9195 | R | Ssp28760MrrP (100% identity) | EcoFLI21MrrP | |
| 9200 | type I restriction-modification system | |||