Escherichia coli Nord8 |
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Putative Escherichia coli Nord8 RM systems
Ref: Braun,S.D. unpublished
REBASE ref # 33101
| Sequence length: | GenBank #: | |
| Chromosome: | 5,132,810 bp | CP139794 |
| plasmid pNORD8_1: | 116,100 bp | CP139795 |
| plasmid pNORD8_2: | 89,600 bp | CP139796 |
| plasmid pNORD8_3: | 86,338 bp | CP139797 |
REBASE acronym: EcoNord8
Org_num: 73589
All begin U0546_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2955 | ISL3-like element ISKpn25 family transposase | |||
| 2960 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | EcoNord8ORF2970P |
| 2965 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.EcoNord8ORF2970P |
| 2970 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.EcoNord8ORF2970P |
| 2975 | transaldolase family protein | |||
| 3760 | transcriptional regulator LrhA | |||
| 3765 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.EcoNord8ORF3765P |
| 3770 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.EcoNord8ORF3765P |
| 3775 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | EcoNord8ORF3765P |
| 3780 | ISL3-like element ISKpn25 family transposase | |||
| 15335 | type IV toxin-antitoxin system AbiEi family | |||
| 15340 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoNord8ORF15345P |
| 15345 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoNord8ORF15345P |
| 15350 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoNord8ORF15345P |
| 15355 | ash family protein | |||
| 16050 | ISL3-like element ISKpn25 family transposase | |||
| 16055 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | EcoNord8ORF16065P |
| 16060 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.EcoNord8ORF16065P |
| 16065 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.EcoNord8ORF16065P |
| 16070 | 0 aa hypothetical protein | |||
| 16390 | ISL3-like element ISKpn25 family transposase | |||
| 16395 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | EcoNord8ORF16405P |
| 16400 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.EcoNord8ORF16405P |
| 16405 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.EcoNord8ORF16405P |
| 16410 | cell division protein FtsZ | |||
| 17205 | restriction endonuclease | |||
| 17210 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoNord8ORF17210P |
| 17215 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoNord8ORF17210P |
| 17220 | R | EcosS9ORF3165P (64% identity) | RTACNNNNGTG | EcoNord8ORF17210AP |
| 17225 | IS1-like element IS1A family transposase | |||
| 17230 | R | EcosS9ORF3165P (35% identity) | RTACNNNNGTG | EcoNord8ORF17210BP |
| 17235 | endoribonuclease SymE | |||
| 25045 | ISL3-like element ISKpn25 family transposase | |||
| 25050 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | EcoNord8ORF25060P |
| 25055 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.EcoNord8ORF25060P |
| 25060 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.EcoNord8ORF25060P |
| 25065 | capsular biosynthesis protein | |||
| plasmid pNORD8_1 | ||||
| 25235 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.EcoNord8ORF25235P |
| 25240 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.EcoNord8ORF25235P |
| 25245 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | EcoNord8ORF25235P |
| 25250 | ISL3-like element ISKpn25 family transposase | |||
| plasmid pNORD8_2 | ||||
| 26325 | IS1-like element IS1A family transposase | |||
| 26330 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoNord8ORF26340P |
| 26335 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoNord8ORF26340P |
| 26340 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoNord8ORF26340P |
| 26345 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1930 | glutarate dioxygenase GlaH | |||
| 1935 | M | M.Ecoi64ORF2425P (100% identity) | M.EcoNord8ORF1935P | |
| 1940 | AAA family ATPase | |||
| 5955 | phosphohydrolase | |||
| 5960 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoNord8DcmP |
| 5965 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoNord8DcmP |
| 5970 | drug/metabolite exporter YedA | |||
| 9515 | DUF3927 family protein | |||
| 9530 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoNord8ORF9530P |
| 9535 | TrmB family transcriptional regulator | |||
| 11790 | helix-turn-helix transcriptional regulator | |||
| 11795 | M | M.KpnYN1ORFGP (89% identity) | M.EcoNord8ORF11795P | |
| 11800 | 71 aa hypothetical protein | |||
| 17580 | McrC family protein | |||
| 17585 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoNord8ORF17590P |
| 17590 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoNord8ORF17590P |
| 17595 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoNord8ORF17590P |
| 17600 | helix-turn-helix domain-containing protein | |||
| 22830 | cell division protein DamX | |||
| 22835 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNord8DamP |
| 22840 | ribulose-phosphate 3-epimerase | |||
| 23430 | DUF2556 family protein | |||
| 23435 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoNord8ORF23435P |
| 23440 | DNA-binding transcriptional regulator Fis | |||
| plasmid pNORD8_1 | ||||
| 25855 | 73 aa hypothetical protein | |||
| 25860 | M | M.SmaBWH35ORF25885P (100% identity) | M.EcoNord8ORF25860P | |
| 25865 | 56 aa hypothetical protein | |||
| plasmid pNORD8_2 | ||||
| 26265 | 73 aa hypothetical protein | |||
| 26270 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoNord8ORF26270P |
| 26275 | 103 aa hypothetical protein | |||
| plasmid pNORD8_3 | ||||
| 26490 | 73 aa hypothetical protein | |||
| 26495 | M | M.SspPIBORF23080P (100% identity) | M.EcoNord8ORF26495P | |
| 26500 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17570 | glycosyltransferase family 2 protein | |||
| 17575 | R | EcosS3McrBP (100% identity) | EcoNord8McrBP | |
| 17580 | R | EcosS9McrCP (100% identity) | EcoNord8McrCP | |
| 17585 | Alw26I/Eco31I/Esp3I family type II restriction | |||