Escherichia coli TP6-3 |
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Putative Escherichia coli TP6-3 RM systems
Ref: Tian,D. unpublished
REBASE ref # 33986
Complete sequence: 4,681,278 bp
GenBank #: CP139669
REBASE acronym: EcoTP63
Org_num: 73433
All begin UMY52_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1040 | cell division protein DamX | |||
| 1045 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTP63DamP |
| 1050 | ribulose-phosphate 3-epimerase | |||
| 1665 | DUF2556 family protein | |||
| 1670 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoTP63ORF1670P |
| 1675 | DNA-binding transcriptional regulator Fis | |||
| 8240 | phosphohydrolase | |||
| 8245 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoTP63DcmP |
| 8250 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoTP63DcmP |
| 8255 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12470 | isocitrate/isopropylmalate family dehydrogenase | |||
| 12475 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoTP63ORF12475P |
| 12480 | site-specific DNA recombinase | |||
| 18955 | GTPase | |||
| 18960 | R | SenHNK130MrrP (100% identity) | EcoTP63MrrP | |
| 18965 | type I restriction-modification system | |||
| 18980 | endoribonuclease SymE | |||
| 18985 | R | SenHNK130McrBP (100% identity) | EcoTP63McrBP | |
| 18990 | R | SenHNK130McrCP (100% identity) | EcoTP63McrCP | |
| 18995 | 978 aa hypothetical protein | |||