Escherichia coli O157:H7 EDL933 |
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Putative Escherichia coli O157:H7 EDL933 RM systems
Ref: Peroutka-Bigus,N. et al. unpublished
REBASE ref # 37890
Complete sequence: 5,415,025 bp
GenBank #: CP111105
REBASE acronym: EcoEDL933
Org_num: 73105
All begin ORM96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10890 | DUF262 domain-containing protein | |||
| 10895 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoEDL933ORF10900P |
| 10900 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoEDL933ORF10900P |
| 10905 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoEDL933ORF10900P |
| 10910 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1955 | DUF1737 domain-containing protein | |||
| 1970 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoEDL933ORF1970P | |
| 1975 | TrmB family transcriptional regulator | |||
| 11125 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoEDL933ORF11125P |
| 11130 | DEAD/DEAH box helicase | |||
| 11160 | N-acetylneuraminic acid mutarotase | |||
| 11165 | R | Ecos1613ORF26795P (100% identity) | EcoEDL933ORF11165P | |
| 11170 | transposase | |||
| 16270 | cell division protein DamX | |||
| 16275 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEDL933DamP |
| 16280 | ribulose-phosphate 3-epimerase | |||
| 16785 | DUF2556 family protein | |||
| 16790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoEDL933ORF16790P |
| 16795 | DNA-binding transcriptional regulator Fis | |||
| 22705 | recombination protein NinB | |||
| 22710 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoEDL933ORF22710P |
| 22715 | NinE family protein | |||
| 24055 | phosphohydrolase | |||
| 24060 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoEDL933DcmP |
| 24065 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.EcoEDL933DcmP |
| 24070 | drug/metabolite exporter YedA | |||
| 27195 | 35 aa hypothetical protein | |||
| 27200 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoEDL933ORF27200P | |
| 27205 | 329 aa hypothetical protein | |||
| 27210 | R | Ecos15739ORF2910P (100% identity) | EcoEDL933ORF27200P | |
| 27215 | DUF1367 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10910 | endoribonuclease SymE | |||
| 10915 | R | EcosPA8GmrSDP (55% identity) | EcoEDL933GmrDP | |
| 10920 | R | Ecos1613GmrSP (100% identity) | EcoEDL933GmrSP | |
| 10925 | cytoplasmic protein | |||