Neisseria gonorrhoeae TH2288 |
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Putative Neisseria gonorrhoeae TH2288 RM systems
Ref: Golparian,D. unpublished
REBASE ref # 34767
Complete sequence: 2,227,834 bp
GenBank #: CP138339
REBASE acronym: Ngo8
Org_num: 73007
All begin SE146_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2075 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNGTC | M.Ngo8ORF2075P |
| 2080 | DNA damage-inducible protein D | |||
| 2085 | S | S.NgoWMII (100% identity) | GCANNNNNNGTC | S.Ngo8ORF2075P |
| 2090 | R | Ngo3ORF2070P (100% identity) | GCANNNNNNGTC | Ngo8ORF2075P |
| 2095 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3570 | replication-associated recombination protein A | |||
| 3575 | R | NgoWLIP (99% identity) | GAGNNNNNTAC | Ngo8ORF3600P |
| 3580 | hydroxyacid dehydrogenase | |||
| 3585 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo8ORF3600P |
| 3590 | 186 aa hypothetical protein | |||
| 3595 | 279 aa hypothetical protein | |||
| 3600 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo8ORF3600P |
| 3605 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo8ORF45P |
| 40 | restriction endonuclease | |||
| 45 | M | M.Ngo3ORF45P (100% identity) | GATC | M.Ngo8ORF45P |
| 50 | 184 aa hypothetical protein | |||
| 1535 | phenylalanine--tRNA ligase subunit alpha | |||
| 1540 | V | V.NgoWSORF391P (100% identity) | V.Ngo8ORF1545P | |
| ??? | M | M.Ngo3ORF1545P (100% identity) | M.Ngo8ORF1545P | |
| 1555 | R | Npo18661ORFHP (100% identity) | CCGG | Ngo8ORF1545P |
| 1560 | phenylalanine--tRNA ligase subunit beta | |||
| 1870 | uroporphyrinogen decarboxylase | |||
| 1875 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo8ORF1885P | |
| 1880 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo8ORF1885P |
| 1885 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo8ORF1885P |
| 1890 | DNA repair protein RadA | |||
| 3455 | 3-isopropylmalate dehydrogenase | |||
| 3460 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo8ORF3465P |
| 3465 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo8ORF3465P |
| 3470 | 3-isopropylmalate dehydratase small subunit | |||
| 4735 | anthranilate synthase component I | |||
| 4740 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo8ORF4740P |
| 4745 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo8ORF4740P |
| 4750 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6090 | replication initiation factor domain-containing | |||
| 6095 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo8ORF6110P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo8ORF6110P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo8ORF6110P |
| 6120 | 48 aa hypothetical protein | |||
| 6305 | excinuclease ABC subunit UvrA | |||
| 6310 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo8ORF6315P |
| 6315 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo8ORF6315P |
| 6320 | 62 aa hypothetical protein | |||
| 9590 | FUSC family protein | |||
| 9595 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo8ORF9600P |
| 9600 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo8ORF9600P |
| 9605 | ribosome recycling factor | |||
| 10125 | 58 aa hypothetical protein | |||
| 10130 | R | NgoPID18ORF1848P (100% identity) | GGTGA | Ngo8ORF10135P |
| 10135 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo8ORF10135P |
| 10140 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo8ORF10135P |
| 10145 | Tex family protein | |||
| 10730 | GTPase ObgE | |||
| 10735 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.Ngo8ORF10735P |
| 10740 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo8ORF10735P |
| 10745 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2810 | peptidylprolyl isomerase | |||
| 2815 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo8ORF2815P | |
| 2820 | R | Ngos1291ORF8455P (100% identity) | Ngo8ORF2815P | |
| 2825 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3270 | alpha-hydroxy acid oxidase | |||
| 3275 | R | NgoCT602ORF3210P (100% identity) | GCAGA | Ngo8ORF3280P |
| ??? | M | M.NgoJH7ORFKP (100% identity) | GCAGA | M.Ngo8ORF3280P |
| 3290 | tRNA pseudouridine(55) synthase TruB | |||