Lactobacillus johnsonii KD1 |
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Putative Lactobacillus johnsonii KD1 RM systems
Ref: Dekham,K. et al. unpublished
REBASE ref # 37799
| Sequence length: | GenBank #: | |
| Chromosome: | 1,873,159 bp | CP118625 |
| plasmid pLJKD1: | 15,425 bp | CP118626 |
REBASE acronym: LjoKD1
Org_num: 72738
All begin PWA57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5295 | restriction endonuclease | |||
| 5300 | S | S2.Lmu6426ORFDP (30% identity) | S3.LjoKD1ORF5330P | |
| 5305 | S | S2.LjoN31ORF6785P (45% identity) | S2.LjoKD1ORF5330P | |
| 5310 | type II toxin-antitoxin system Phd/YefM family | |||
| 5315 | Txe/YoeB family addiction module toxin | |||
| 5320 | site-specific integrase | |||
| 5325 | S | S1.LjoN31ORF6785P (63% identity) | S1.LjoKD1ORF5330P | |
| 5330 | M | M.Ljo9203ORF1060P (82% identity) | M.LjoKD1ORF5330P | |
| 5335 | R | Lga1199ORF5265P (91% identity) | LjoKD1ORF5330P | |
| 5340 | tetratricopeptide repeat protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pLJKD1 | ||||
| 9175 | 43 aa hypothetical protein | |||
| 9180 | R | LjoGHZ10aORFCP (92% identity) | LjoKD1ORF9185P | |
| 9185 | M | M.LjoGHZ10aORFCP (100% identity) | M.LjoKD1ORF9185P | |
| 9190 | V | V.LjoGHZ10aORFCP (100% identity) | V.LjoKD1ORF9185P | |
| 9195 | DUF5388 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 205 | exodeoxyribonuclease III | |||
| 210 | R | Ljo6026ORF44P (99% identity) | LjoKD1ORF210P | |
| 215 | alpha/beta hydrolase | |||
| 5285 | prenyltransferase | |||
| 5290 | R | LjoN31MrrP (99% identity) | LjoKD1Mrr2P | |
| 5295 | restriction endonuclease | |||
| 5970 | IS30 family transposase | |||
| 5975 | R | LgaK7Mrr2P (29% identity) | LjoKD1MrrP | |
| 5980 | IS256 family transposase | |||