Escherichia coli HNSQ2209 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli HNSQ2209 RM systems
Ref: Xu,G. et al. unpublished
REBASE ref # 37787
| Sequence length: | GenBank #: | |
| Chromosome: | 5,158,836 bp | CP137737 |
| plasmid unnamed1: | 142,379 bp | CP137738 |
| plasmid unnamed2: | 187,535 bp | CP137739 |
| plasmid unnamed3: | 74,875 bp | CP137740 |
| plasmid unnamed4: | 79,082 bp | CP137741 |
REBASE acronym: Eco209
Org_num: 72617
All begin R7234_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5930 | GTPase family protein | |||
| 5935 | M | M.EcoEC521ORF29600P (100% identity) | M.Eco209ORF5935P | |
| 5940 | S | S.Eco2A1ORF16705P (100% identity) | S1.Eco209ORF5935P | |
| 5945 | IS5-like element ISKpn26 family transposase | |||
| ??? | S | S2.Eco45C19ORF2350P (93% identity) | S2.Eco209ORF5935P | |
| 5955 | hemagglutinin repeat-containing protein | |||
| 23375 | AAA family ATPase | |||
| 23380 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco209ORF23395P |
| 23385 | SAM-dependent DNA methyltransferase | |||
| 23390 | IS5 family transposase | |||
| 23395 | M | M.SspZ54ORF5015P (87% identity) | TGANNNNNNCTTC | M.Eco209ORF23395P |
| 23400 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco209ORF23395P |
| 23405 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 335 | osmoprotectant transport activator ProQ | |||
| 340 | M | M.SflFF24DndBP (100% identity) | M.Eco209DndBP | |
| 345 | DNA phosphorothioation system sulfurtransferase | |||
| 340 | DNA sulfur modification protein DndB | |||
| 345 | M | M.SflFF24DndCP (100% identity) | M.Eco209DndCP | |
| 350 | DNA sulfur modification protein DndD | |||
| 345 | DNA phosphorothioation system sulfurtransferase | |||
| 350 | M | M.SflFF24DndDP (100% identity) | M.Eco209DndDP | |
| 355 | DNA sulfur modification protein DndE | |||
| 350 | DNA sulfur modification protein DndD | |||
| 355 | M | M.SflFF24DndEP (100% identity) | M.Eco209DndEP | |
| 360 | 126 aa hypothetical protein | |||
| 380 | accessory gene regulator B family protein | |||
| 385 | R | EcosEC5DptHP (99% identity) | Eco209DptHP | |
| 390 | DNA phosphorothioation-dependent restriction | |||
| 385 | DNA phosphorothioation-dependent restriction | |||
| 390 | R | SflFF24DptGP (100% identity) | Eco209DptGP | |
| 395 | DNA phosphorothioation-dependent restriction | |||
| 390 | DNA phosphorothioation-dependent restriction | |||
| 395 | R | SflFF24DptFP (100% identity) | Eco209DptFP | |
| 400 | integrase | |||
| 2180 | cell division protein DamX | |||
| 2185 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco209DamP |
| 2190 | ribulose-phosphate 3-epimerase | |||
| 2810 | DUF2556 family protein | |||
| 2815 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco209ORF2815P |
| 2820 | DNA-binding transcriptional regulator Fis | |||
| 6275 | TrmB family transcriptional regulator | |||
| 6280 | M | M.Ecocq9ORF19465P (100% identity) | M.Eco209ORF6280P | |
| 6300 | Shiga toxin Stx2e subunit A | |||
| 6855 | Com family DNA-binding transcriptional | |||
| 6860 | M | M.Eco2A1ORF7230P (100% identity) | M.Eco209ORF6860P | |
| 6865 | ribosome-associated translation inhibitor RaiA | |||
| 10290 | phosphohydrolase | |||
| 10295 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco209DcmP |
| 10300 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco209DcmP |
| 10305 | drug/metabolite exporter YedA | |||
| 17815 | phosphoadenosine phosphosulfate reductase family | |||
| 17820 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco209ORF17820P |
| 17825 | recombination protein NinB | |||
| 22145 | BREX-1 system phosphatase PglZ type A | |||
| 22150 | RM | SflLIN6ORF19750P (100% identity) | Eco209ORF22150P | |
| 22155 | DUF262 domain-containing protein | |||
| 22595 | IS630-like element ISEc33 family transposase | |||
| 22600 | R | EcostT2ORF19975P (100% identity) | GAAC | Eco209ORF22600P |
| 22605 | integrase arm-type DNA-binding domain-containing | |||
| plasmid unnamed1 | ||||
| 26400 | 103 aa hypothetical protein | |||
| 26405 | M | M.Ecocq9ORF29710P (100% identity) | M.Eco209ORF26405P | |
| 26410 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 27625 | thermonuclease family protein | |||
| 27630 | M | M.Eco6EVAORFBP (99% identity) | M.Eco209ORF27630P | |
| 27635 | DUF1173 family protein | |||
| plasmid unnamed3 | ||||
| 28055 | 103 aa hypothetical protein | |||
| 28060 | M | M.Ecocq9ORF29710P (100% identity) | M.Eco209ORF28060P | |
| 28065 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 28560 | 97 aa hypothetical protein | |||
| 28565 | M | M.Xca80ORFEP (100% identity) | M.Eco209ORF28565P | |
| 28570 | 73 aa hypothetical protein | |||