Ligilactobacillus salivarius C2-1 |
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Putative Ligilactobacillus salivarius C2-1 RM systems
Ref: Jin,L. and Mu,Y. unpublished
REBASE ref # 37802
Complete sequence: 1,719,271 bp
GenBank #: CP137608
REBASE acronym: LsaC21
Org_num: 72741
All begin R6M76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 790 | ornithine decarboxylase | |||
| 795 | S | S2.Lsa30AORF4499P (60% identity) | S3.LsaC21ORF810P | |
| 800 | R | LsaGJ24ORF105P (98% identity) | LsaC21ORF810P | |
| 805 | S | S.LpaNSMJ16ORF12070P (66% identity) | S1.LsaC21ORF810P | |
| 810 | M | M.Lsa51ORF1108P (99% identity) | M.LsaC21ORF810P | |
| 815 | S | S4.Lsa51ORF5828P (51% identity) | S2.LsaC21ORF810P | |
| 820 | tyrosine-type recombinase/integrase | |||
| 4260 | PTS transporter subunit EIIC | |||
| 4265 | S | S2.LsaDJORFAP (37% identity) | S4.LsaC21ORF4290P | |
| 4270 | S | S3.LsaGJ24ORF1047P (51% identity) | S3.LsaC21ORF4290P | |
| 4275 | S | S1.LsaZLp4bORFFP (57% identity) | S2.LsaC21ORF4290P | |
| 4280 | site-specific integrase | |||
| 4285 | S | S1.LsaDJORFAP (63% identity) | S1.LsaC21ORF4290P | |
| 4290 | M | M.LsaGJ24ORF1047P (99% identity) | M.LsaC21ORF4290P | |
| 4295 | R | Lsacp400ORF20901P (97% identity) | LsaC21ORF4290P | |
| 4300 | 78 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1300 | TetR/AcrR family transcriptional regulator | |||
| 1305 | R | SfaNI (56% identity) | LsaC21ORF1310P | |
| 1310 | M | M.Tha26042ORF3960P (67% identity) | M.LsaC21ORF1310P | |
| 1315 | transporter substrate-binding domain-containing | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6140 | 109 aa hypothetical protein | |||
| 6145 | R | Lsacp400MrrP (98% identity) | LsaC21MrrP | |
| 6150 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||