Escherichia coli 2017.20.01CC |
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Putative Escherichia coli 2017.20.01CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,731,100 bp | AP027865 |
| plasmid p2017.20.01CC_1: | 126,684 bp | AP027866 |
| plasmid p2017.20.01CC_2: | 111,265 bp | AP027867 |
REBASE acronym: Eco2001CC
Org_num: 72605
All begin VEE65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9680 | 67 aa hypothetical protein | |||
| 9690 | R | Csp944ORF5275P (100% identity) | Eco2001CCORF9710P | |
| 9700 | S | S.KpnS1313ORF16435P (62% identity) | S.Eco2001CCORF9710P | |
| 9710 | M | M.EcoP44ORFBP (100% identity) | M.Eco2001CCORF9710P | |
| 9720 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3210 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2001CCDamP |
| 3230 | ribulose-phosphate 3-epimerase | |||
| 4370 | acrEF/envCD operon repressor | |||
| 4380 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco2001CCORF4380P |
| 4390 | DNA-binding protein Fis | |||
| 25510 | protein ninX | |||
| 25520 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco2001CCORF25520P |
| 25530 | protein ninB | |||
| 29010 | replication endonuclease from | |||
| 29020 | M | M.EcoPE15ORF23185P (100% identity) | GATC | M.Eco2001CCORF29020P |
| 29030 | 75 aa hypothetical protein | |||
| 32210 | protein ninX | |||
| 32220 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco2001CCORF32220P |
| 32230 | protein ninB | |||
| 35300 | phage holin, lambda family protein | |||
| 35310 | M | M.EcoLD271ORF4275P (100% identity) | M.Eco2001CCORF35310P | |
| 35320 | 64 aa hypothetical protein | |||
| 35370 | LexA family transcriptional regulator | |||
| 35380 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco2001CCORF35380P |
| 35390 | 162 aa hypothetical protein | |||
| plasmid p2017.20.01CC_1 | ||||
| 45430 | 73 aa hypothetical protein | |||
| 45440 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco2001CCORF45440P |
| 45450 | 308 aa hypothetical protein | |||
| plasmid p2017.20.01CC_2 | ||||
| 46590 | transcriptional regulator | |||
| 46600 | R | EcoPSJ29ORF43810P (100% identity) | GCWGC | Eco2001CCORF46600P |
| 46610 | 125 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25140 | 50 aa hypothetical protein | |||
| 25150 | R | EmaE2C08McrCP (98% identity) | Eco2001CCMcrCP | |
| 25160 | R | EcoUKMcrBP (100% identity) | Eco2001CCMcrBP | |
| 25170 | repressor TnpA | |||