Escherichia coli 2017.18.04CC |
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Putative Escherichia coli 2017.18.04CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,944,711 bp | AP027850 |
| plasmid p2017.18.04CC_1: | 168,686 bp | AP027851 |
REBASE acronym: Eco804CC
Org_num: 72604
All begin VEE64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 40200 | 139 aa hypothetical protein | |||
| 40210 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco804CCORF40220P |
| 40220 | M | M.SflTORF4636P (98% identity) | CCANNNNNNNNNTTGG | M.Eco804CCORF40220P |
| 40230 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco804CCORF40220P |
| 40240 | endoribonuclease SymE | |||
| 40650 | 128 aa hypothetical protein | |||
| 40660 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.Eco804CCORF40660P |
| 40670 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco804CCORF40660P |
| 40680 | 433 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3650 | cell division protein DamX | |||
| 3660 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco804CCDamP |
| 3670 | ribulose-phosphate 3-epimerase | |||
| 4630 | acrEF/envCD operon transcriptional regulator | |||
| 4640 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco804CCORF4640P |
| 4650 | DNA-binding protein Fis | |||
| 17890 | 101 aa hypothetical protein | |||
| 17900 | M | M.Eco95NR1ORF3961P (100% identity) | GATC | M.Eco804CCORF17900P |
| 17910 | protein ninF | |||
| 19410 | 231 aa hypothetical protein | |||
| 19420 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco804CCDcmP |
| 19430 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.Eco804CCDcmP |
| 19440 | inner membrane transporter YedA | |||
| 40600 | 9-O-acetyl-N-acetylneuraminic acid | |||
| ??? | R | SflN101ORF11875P (100% identity) | Eco804CCORF40610P | |
| 40630 | 691 aa hypothetical protein | |||
| plasmid p2017.18.04CC_1 | ||||
| 46720 | plasmid stability protein StbA | |||
| 46730 | M | M.Sen527ORF25750P (100% identity) | M.Eco804CCORF46730P | |
| 46740 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 40240 | endoribonuclease SymE | |||
| ??? | R | SflN101GmrSP (100% identity) | Eco804CCGmrSP | |
| 40270 | 49 aa hypothetical protein | |||
| 40620 | 187 aa hypothetical protein | |||
| 40630 | R | SflN101McrBP (100% identity) | Eco804CCMcrBP | |
| 40640 | R | SflN101McrCP (100% identity) | Eco804CCMcrCP | |
| 40650 | 128 aa hypothetical protein | |||