Escherichia coli 2017.15.02CC |
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Putative Escherichia coli 2017.15.02CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,862,130 bp | AP027818 |
| plasmid p2017.15.02CC_2: | 6,180 bp | AP027820 |
REBASE acronym: Eco502CC
Org_num: 72599
All begin VEE59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7850 | 104 aa hypothetical protein | |||
| 7860 | R | EcosS1ORF25140P (100% identity) | TGANNNNNNCTTC | Eco502CCORF7870P |
| 7870 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco502CCORF7870P |
| 7880 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco502CCORF7870P |
| 7890 | 540 aa hypothetical protein | |||
| 11090 | 290 aa hypothetical protein | |||
| 11100 | M | M.EcoB379ORF5755P (100% identity) | M.Eco502CCORF11100P | |
| 11110 | S | S.Eco886RtORF3295P (100% identity) | S.Eco502CCORF11100P | |
| 11120 | R | EcoB379ORF5755P (100% identity) | Eco502CCORF11100P | |
| 11130 | 61 aa hypothetical protein | |||
| 22860 | metal-dependent hydrolase | |||
| 22870 | R | EcoLD931ORF10715P (100% identity) | Eco502CCORF22900P | |
| 22880 | 227 aa hypothetical protein | |||
| 22890 | S | S.EcoLD931ORF10715P (100% identity) | S.Eco502CCORF22900P | |
| 22900 | M | M.KpnLZORFCP (100% identity) | M.Eco502CCORF22900P | |
| 22910 | 382 aa hypothetical protein | |||
| 35030 | transposase | |||
| 35040 | M | M.Eco3151ORF1322P (100% identity) | M.Eco502CCORF35040P | |
| 35050 | 729 aa hypothetical protein | |||
| 39890 | restriction endonuclease | |||
| 39900 | R | Eco266ORF19185P (99% identity) | ACANNNNNNNNTGCC | Eco502CCORF39910P |
| 39910 | M | M.EcoA30I (99% identity) | ACANNNNNNNNTGCC | M.Eco502CCORF39910P |
| 39920 | S | S.EcoSC3I (97% identity) | ACANNNNNNNNTGCC | S.Eco502CCORF39910P |
| 39930 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3390 | cell division protein DamX | |||
| 3400 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco502CCDamP |
| 3410 | ribulose-phosphate 3-epimerase | |||
| 4470 | acrEF/envCD operon repressor | |||
| 4480 | M | M.EcoM9812ORF4540P (100% identity) | ATGCAT | M.Eco502CCORF4480P |
| 4490 | DNA-binding protein Fis | |||
| 12560 | integrase | |||
| 12570 | M | M.Eco91H1ORF5825P (99% identity) | M.Eco502CCORF12570P | |
| 12580 | DUF1317 domain-containing protein | |||
| 18360 | phosphohydrolase | |||
| 18370 | M | M.Eco3151DcmP (99% identity) | CCWGG | M.Eco502CCDcmP |
| 18380 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco502CCDcmP |
| 18390 | multidrug transporter | |||
| 35480 | protein ninF | |||
| 35490 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco502CCORF35490P |
| 35500 | 60 aa hypothetical protein | |||
| 35770 | 326 aa hypothetical protein | |||
| 35780 | R | EcoSanORF1630P (100% identity) | CCWGG | Eco502CCORF35790P |
| 35790 | M | M.EcoSanORF1630P (99% identity) | M.Eco502CCORF35790P | |
| 35800 | 257 aa hypothetical protein | |||
| 36160 | phage holin, lambda family protein | |||
| 36170 | M | M.Eco502CCORF39440P (100% identity) | M.Eco502CCORF36170P | |
| 36180 | 64 aa hypothetical protein | |||
| 39430 | phage holin, lambda family protein | |||
| 39440 | M | M.Eco502CCORF36170P (100% identity) | M.Eco502CCORF39440P | |
| 39450 | 67 aa hypothetical protein | |||
| plasmid p2017.15.02CC_2 | ||||
| 47100 | rop protein | |||
| 47110 | M | M.Eas52ORF22790P (98% identity) | ATGCAT | M.Eco502CCORF47110P |
| 47120 | R | KpnKP2ORF28600P (98% identity) | Eco502CCORF47110P | |
| 47130 | C | C.EcoTB22ORFAP (85% identity) | C.Eco502CCORF47110P | |
| 47140 | 65 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39930 | endoribonuclease SymE | |||
| 39940 | R | Eco42C22McrBP (98% identity) | Eco502CCMcrBP | |
| 39950 | R | Eco40C21McrCP (99% identity) | Eco502CCMcrCP | |