Escherichia coli 2017.03.04CC |
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Putative Escherichia coli 2017.03.04CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,476,476 bp | AP027775 |
| plasmid p2017.03.04CC_1: | 43,746 bp | AP027776 |
| plasmid p2017.03.04CC_3: | 26,235 bp | AP027778 |
REBASE acronym: Eco304CC
Org_num: 72593
All begin VEE53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10220 | 376 aa hypothetical protein | |||
| 10230 | M | M.EcoK2ORF10120P (99% identity) | M.Eco304CCORF10230P | |
| 10240 | S | S.EcoL73ORF9840P (72% identity) | S.Eco304CCORF10230P | |
| 10250 | 227 aa hypothetical protein | |||
| 10260 | R | Eco65TORF11860P (98% identity) | Eco304CCORF10230P | |
| 10270 | metal-dependent hydrolase | |||
| 26390 | 76 aa hypothetical protein | |||
| 26400 | R | Eco761ORFCP (99% identity) | Eco304CCORF26430P | |
| 26410 | 395 aa hypothetical protein | |||
| 26420 | S | S.Eco761ORFCP (98% identity) | S.Eco304CCORF26430P | |
| 26430 | M | M.Tod01ORF16860P (99% identity) | M.Eco304CCORF26430P | |
| 26440 | N-acetyltransferase | |||
| 27010 | transposase | |||
| 27020 | M | M.EcoNT1N34ORFBP (100% identity) | M.Eco304CCORF27020P | |
| 27030 | S | S.EcoPSS16ORF36570P (64% identity) | S.Eco304CCORF27020P | |
| 27040 | R | EcoNT1N34ORFBP (99% identity) | Eco304CCORF27020P | |
| 27050 | IS5 family transposase | |||
| plasmid p2017.03.04CC_1 | ||||
| 44660 | 95 aa hypothetical protein | |||
| ??? | S | S.KpnstrKP6ORF23535P (52% identity) | S1.Eco304CCORFAP | |
| 44680 | 70 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9480 | phosphohydrolase | |||
| 9490 | M | M.SflLIN6DcmP (99% identity) | CCWGG | M.Eco304CCDcmP |
| 9500 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco304CCDcmP |
| 9510 | inner membrane transporter YedA | |||
| 24030 | exonuclease | |||
| 24040 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco304CCORF24040P |
| 24050 | 71 aa hypothetical protein | |||
| 30420 | N-acetylneuraminate epimerase | |||
| 30430 | R | SflFF17ORF19275P (95% identity) | Eco304CCORF30430P | |
| 30440 | repressor TnpA | |||
| 40180 | cell division protein DamX | |||
| 40190 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco304CCDamP |
| 40200 | ribulose-phosphate 3-epimerase | |||
| 41210 | acrEF/envCD operon repressor | |||
| 41220 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco304CCORF41220P |
| 41230 | DNA-binding protein Fis | |||
| 44220 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | |||
| 10 | R | Ubap201ORF4P (100% identity) | CCWGG | Eco304CCORF20P |
| 20 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco304CCORF20P |
| 30 | 67 aa hypothetical protein | |||
| plasmid p2017.03.04CC_3 | ||||
| 45430 | 88 aa hypothetical protein | |||
| ??? | M | M.EcoSMBLDcmP (63% identity) | CCWGG | M.Eco304CCORF45450P |
| ??? | R | Kpn531ORF1530P (89% identity) | CCWGG | Eco304CCORF45450P |
| 45480 | 109 aa hypothetical protein | |||