Escherichia coli 2017.03.02CC |
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Putative Escherichia coli 2017.03.02CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,701,976 bp | AP027769 |
| plasmid p2017.03.02CC_1: | 232,080 bp | AP027770 |
| plasmid p2017.03.02CC_2: | 189,778 bp | AP027771 |
REBASE acronym: Eco02CC
Org_num: 72592
All begin VEE52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p2017.03.02CC_2 | ||||
| 47600 | 73 aa hypothetical protein | |||
| 47610 | M | M.EcoH45ORFAP (100% identity) | M.Eco02CCORF47610P | |
| 47620 | S | S.EcoH45ORFAP (99% identity) | S.Eco02CCORF47610P | |
| 47630 | R | EcoH45ORFAP (100% identity) | Eco02CCORF47610P | |
| 47640 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3560 | cell division protein DamX | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco02CCDamP |
| 3580 | ribulose-phosphate 3-epimerase | |||
| 4760 | acrEF/envCD operon repressor | |||
| 4770 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco02CCORF4770P |
| 4780 | DNA-binding protein Fis | |||
| 34420 | LexA family transcriptional regulator | |||
| 34430 | M | M.SflFF22ORF4245P (100% identity) | GATC | M.Eco02CCORF34430P |
| 34440 | 162 aa hypothetical protein | |||
| 38070 | alkaline phosphatase | |||
| 38080 | RM | EcoD02AORF21370P (100% identity) | Eco02CCORF38080P | |
| 38090 | 1213 aa hypothetical protein | |||
| plasmid p2017.03.02CC_1 | ||||
| 44320 | 108 aa hypothetical protein | |||
| 44330 | M | M.YpsF1ORFBP (100% identity) | M.Eco02CCORF44330P | |
| 44340 | 202 aa hypothetical protein | |||
| 44580 | DNA-binding protein | |||
| 44590 | M | M.YpsF1ORFDP (84% identity) | M.Eco02CCORF44590P | |
| 44600 | 85 aa hypothetical protein | |||
| 45800 | 55 aa hypothetical protein | |||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco02CCORF45810P |
| 45830 | nuclease | |||