Escherichia coli PSS-11 |
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Putative Escherichia coli PSS-11 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,767,219 bp | AP027694 |
| plasmid pPSS-11_1: | 209,317 bp | AP027695 |
REBASE acronym: EcoPSS11
Org_num: 72663
All begin VEE21_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12620 | replication endonuclease from | |||
| 12630 | M | M.Ecos64ORF7360P (100% identity) | GATC | M.EcoPSS11ORF12630P |
| 12640 | 75 aa hypothetical protein | |||
| 16120 | phage holin, lambda family protein | |||
| 16130 | M | M.EcoSTEC413ORF8565P (100% identity) | M.EcoPSS11ORF16130P | |
| 16140 | 64 aa hypothetical protein | |||
| 31820 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPSS11DamP |
| 31840 | ribulose-phosphate 3-epimerase | |||
| 33030 | acrEF/envCD operon repressor | |||
| 33040 | M | M.EcoEC291ORF7850P (98% identity) | ATGCAT | M.EcoPSS11ORF33040P |
| 33050 | DNA-binding protein Fis | |||
| 36210 | 587 aa hypothetical protein | |||
| 36220 | RM | M.EfeV (100% identity) | GCTAAT | EcoPSS11ORF36220P |
| 36230 | DNA repair protein | |||
| plasmid pPSS-11_1 | ||||
| 45440 | 55 aa hypothetical protein | |||
| 45450 | M | M.StyCORF187P (100% identity) | CCWGG | M.EcoPSS11ORF45450P |
| 45460 | nuclease | |||
| 46870 | DNA-binding protein | |||
| 46880 | M | M.Ype21801ORF197P (100% identity) | M.EcoPSS11ORF46880P | |
| 46890 | 217 aa hypothetical protein | |||