Escherichia coli PSJ-23 |
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Putative Escherichia coli PSJ-23 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,665,047 bp | AP027637 |
| plasmid pPSJ-23_1: | 237,772 bp | AP027638 |
REBASE acronym: EcoPSJ23
Org_num: 72653
All begin VEE43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17500 | 354 aa hypothetical protein | |||
| 17510 | M | M.Eco184ORF13850P (100% identity) | M.EcoPSJ23ORF17510P | |
| 17520 | S | S.Eco1851ORF17725P (60% identity) | S.EcoPSJ23ORF17510P | |
| 17530 | 227 aa hypothetical protein | |||
| 17540 | 575 aa hypothetical protein | |||
| 17550 | R | Eco1613ORF24145P (99% identity) | EcoPSJ23ORF17510P | |
| 17560 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3360 | cell division protein DamX | |||
| 3370 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPSJ23DamP |
| 3380 | ribulose-phosphate 3-epimerase | |||
| 4570 | 157 aa hypothetical protein | |||
| 4580 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoPSJ23ORF4580P |
| 4590 | DNA-binding protein Fis | |||
| 16890 | 231 aa hypothetical protein | |||
| 16900 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoPSJ23DcmP |
| 16910 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoPSJ23DcmP |
| 16920 | multidrug transporter | |||
| 39780 | Lysis protein S homolog from lambdoid prophage | |||
| 39790 | M | M.Sso63633ORF22290P (100% identity) | M.EcoPSJ23ORF39790P | |
| 39800 | 67 aa hypothetical protein | |||
| 39850 | LexA family transcriptional regulator | |||
| 39860 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.EcoPSJ23ORF39860P |
| 39870 | 162 aa hypothetical protein | |||
| plasmid pPSJ-23_1 | ||||
| 43930 | 55 aa hypothetical protein | |||
| 43940 | M | M.StyCORF187P (100% identity) | CCWGG | M.EcoPSJ23ORF43940P |
| 43950 | nuclease | |||
| 44590 | chromosome segregation protein SMC | |||
| 44600 | RM | EcoS30ORF25190P (100% identity) | EcoPSJ23ORF44600P | |
| 44610 | 1204 aa hypothetical protein | |||
| 45640 | DNA-binding protein | |||
| 45650 | M | M.Ype21801ORF197P (100% identity) | M.EcoPSJ23ORF45650P | |
| 45660 | 217 aa hypothetical protein | |||