Escherichia coli PSJ-22 |
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Putative Escherichia coli PSJ-22 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,861,527 bp
GenBank #: AP027634
REBASE acronym: EcoPSJ22
Org_num: 72652
All begin VEE40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23260 | restriction methylase | |||
| 23270 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.EcoPSJ22ORF23270P |
| 23280 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.EcoPSJ22ORF23270P |
| 23290 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | EcoPSJ22ORF23270P |
| 23300 | alcohol dehydrogenase | |||
| 24810 | 575 aa hypothetical protein | |||
| 24820 | M | M.Eco42C23ORF12160P (100% identity) | M.EcoPSJ22ORF24820P | |
| 24830 | S | S.Eco42C23ORF12160P (100% identity) | S.EcoPSJ22ORF24820P | |
| 24840 | R | Eco42C23ORF12160P (99% identity) | EcoPSJ22ORF24820P | |
| 24850 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1280 | 231 aa hypothetical protein | |||
| 1290 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoPSJ22DcmP |
| 1300 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoPSJ22DcmP |
| 1310 | inner membrane transporter YedA | |||
| 5120 | 65 aa hypothetical protein | |||
| 5130 | M | M.EcoPSJ22ORF8620P (99% identity) | M.EcoPSJ22ORF5130P | |
| 5140 | membrane protein | |||
| 8610 | tellurite resistance protein | |||
| 8620 | M | M.EcoP136ORF10095P (99% identity) | M.EcoPSJ22ORF8620P | |
| 8630 | 65 aa hypothetical protein | |||
| 10700 | tellurite resistance protein | |||
| 10710 | M | M.EcoP136ORF10095P (99% identity) | M.EcoPSJ22ORF10710P | |
| 10720 | 65 aa hypothetical protein | |||
| 12830 | tellurite resistance protein | |||
| 12840 | M | M.Eco0133ORF8195P (100% identity) | M.EcoPSJ22ORF12840P | |
| 12850 | 65 aa hypothetical protein | |||
| 32340 | cell division protein DamX | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPSJ22DamP |
| 32360 | ribulose-phosphate 3-epimerase | |||
| 33370 | acrEF/envCD operon transcriptional regulator | |||
| 33380 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoPSJ22ORF33380P |
| 33390 | DNA-binding protein Fis | |||
| 37120 | 50 aa hypothetical protein | |||
| 37130 | M | M.SflFF24DndBP (100% identity) | M.EcoPSJ22DndBP | |
| 37140 | 544 aa hypothetical protein | |||
| 37130 | 361 aa hypothetical protein | |||
| 37140 | M | M.SflFF24DndCP (100% identity) | M.EcoPSJ22DndCP | |
| 37150 | 666 aa hypothetical protein | |||
| 37140 | 544 aa hypothetical protein | |||
| 37150 | M | M.SflFF24DndDP (99% identity) | M.EcoPSJ22DndDP | |
| 37160 | 118 aa hypothetical protein | |||
| 37150 | 666 aa hypothetical protein | |||
| 37160 | M | M.SflFF24DndEP (100% identity) | M.EcoPSJ22DndEP | |
| 37170 | 197 aa hypothetical protein | |||
| 37200 | 113 aa hypothetical protein | |||
| 37210 | R | EcosEC5DptHP (100% identity) | EcoPSJ22DptHP | |
| 37220 | 441 aa hypothetical protein | |||
| 37210 | 1684 aa hypothetical protein | |||
| 37220 | R | SflFF24DptGP (100% identity) | EcoPSJ22DptGP | |
| 37230 | 549 aa hypothetical protein | |||
| 37220 | 441 aa hypothetical protein | |||
| 37230 | R | SflFF24DptFP (100% identity) | EcoPSJ22DptFP | |
| 37240 | adhesin | |||