Escherichia coli LR-72 |
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Putative Escherichia coli LR-72 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,765,859 bp
GenBank #: AP027612
REBASE acronym: EcoLR72
Org_num: 72644
All begin VEE35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10480 | metal-dependent hydrolase | |||
| 10490 | R | EcosNDM5ORF9185P (100% identity) | EcoLR72ORF10490P | |
| 10500 | repressor TnpA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7110 | transposase | |||
| ??? | M | M.SsoSE61ORF20220P (94% identity) | M.EcoLR72ORFAP | |
| 7130 | 140 aa hypothetical protein | |||
| 11070 | inner membrane transporter YedA | |||
| 11080 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoLR72DcmP |
| 11090 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoLR72DcmP |
| 11100 | 231 aa hypothetical protein | |||
| 15470 | protein ninF | |||
| 15480 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoLR72ORF15480P |
| 15490 | protein ninB | |||
| 24770 | DNA-binding protein Fis | |||
| 24780 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoLR72ORF24780P |
| 24790 | 144 aa hypothetical protein | |||
| 25950 | ribulose-phosphate 3-epimerase | |||
| 25960 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLR72DamP |
| 25970 | cell division protein DamX | |||
| 35150 | mcrBC 5-methylcytosine restriction system | |||
| 35160 | R | SflSTLE4ORF19250P (100% identity) | EcoLR72ORF35160P | |
| 35170 | 9-O-acetyl-N-acetylneuraminic acid | |||
| 43860 | 75 aa hypothetical protein | |||
| 43870 | M | M.SflN92ORF14970P (100% identity) | GATC | M.EcoLR72ORF43870P |
| 43880 | replication endonuclease from | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35130 | 78 aa hypothetical protein | |||
| 35140 | R | SflSTLE4McrBP (100% identity) | EcoLR72McrBP | |
| 35150 | R | SflSTLE4McrCP (100% identity) | EcoLR72McrCP | |
| 35160 | restriction endonuclease | |||