Escherichia coli LR-58-1 |
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Putative Escherichia coli LR-58-1 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,730,732 bp | AP027553 |
| plasmid pLR-58-1_2: | 86,732 bp | AP027555 |
| plasmid pLR-58-1_3: | 69,999 bp | AP027556 |
REBASE acronym: EcoLR581
Org_num: 72637
All begin VEE07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10650 | 125 aa hypothetical protein | |||
| 10660 | R | Ror24150ORF17255P (100% identity) | EcoLR581ORF10700P | |
| 10670 | S | S.EcoSCU118ORF5500P (29% identity) | S2.EcoLR581ORF10700P | |
| 10680 | IS5 family transposase | |||
| 10690 | S | S.EcoSCU118ORF5500P (69% identity) | S1.EcoLR581ORF10700P | |
| 10700 | M | M.EcoSCU118ORF5500P (100% identity) | M.EcoLR581ORF10700P | |
| 10710 | 87 aa hypothetical protein | |||
| 37050 | 244 aa hypothetical protein | |||
| 37060 | R | Eco9699IP (99% identity) | EcoLR581ORF37070P | |
| 37070 | M | M.Eal895ORF21870P (99% identity) | M.EcoLR581ORF37070P | |
| 37080 | S | S.PwaORF1671P (63% identity) | S.EcoLR581ORF37070P | |
| 37090 | toxic protein SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3210 | cell division protein DamX | |||
| 3220 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLR581DamP |
| 3230 | ribulose-phosphate 3-epimerase | |||
| 4370 | acrEF/envCD operon repressor | |||
| 4380 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoLR581ORF4380P |
| 4390 | DNA-binding protein Fis | |||
| 17900 | phosphohydrolase | |||
| 17910 | M | M.SdySWHE2DcmP (99% identity) | CCWGG | M.EcoLR581DcmP |
| 17920 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoLR581DcmP |
| 17930 | inner membrane transporter YedA | |||
| plasmid pLR-58-1_2 | ||||
| 44970 | 308 aa hypothetical protein | |||
| 44980 | M | M.Sso11ORF329P (100% identity) | M.EcoLR581ORF44980P | |
| 44990 | 73 aa hypothetical protein | |||
| plasmid pLR-58-1_3 | ||||
| 45920 | 308 aa hypothetical protein | |||
| 45930 | M | M.Ecop11BORF27295P (100% identity) | M.EcoLR581ORF45930P | |
| 45940 | 73 aa hypothetical protein | |||