Escherichia coli LR-45 |
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Putative Escherichia coli LR-45 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,690,285 bp | AP027532 |
| plasmid pLR-45_1: | 86,444 bp | AP027533 |
REBASE acronym: EcoLR45
Org_num: 72633
All begin VEE10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23950 | metal-dependent hydrolase | |||
| 23960 | R | EcoM9ORF9685P (100% identity) | EcoLR45ORF23990P | |
| 23970 | 227 aa hypothetical protein | |||
| 23980 | S | S.EcoCP61ORF17550P (99% identity) | S.EcoLR45ORF23990P | |
| 23990 | M | M.EcoEC98ORF23975P (100% identity) | M.EcoLR45ORF23990P | |
| 24000 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12910 | 75 aa hypothetical protein | |||
| 12920 | M | M.EcosBORF4330P (100% identity) | GATC | M.EcoLR45ORF12920P |
| 12930 | 299 aa hypothetical protein | |||
| 24510 | multidrug transporter | |||
| 24520 | V | V.SsoSE61DcmP (99% identity) | V.EcoLR45DcmP | |
| 24530 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoLR45DcmP |
| 24540 | 231 aa hypothetical protein | |||
| 36970 | DNA-binding protein Fis | |||
| 36980 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoLR45ORF36980P |
| 36990 | acrEF/envCD operon repressor | |||
| 38080 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLR45DamP |
| 38100 | cell division protein DamX | |||
| plasmid pLR-45_1 | ||||
| 43860 | plasmid stability protein StbA | |||
| 43870 | M | M.EcoY18JORF350P (100% identity) | M.EcoLR45ORF43870P | |
| 43880 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4100 | 49 aa hypothetical protein | |||
| 4110 | R | EcoG178GmrSDP (99% identity) | EcoLR45GmrSDP | |
| 4120 | endoribonuclease SymE | |||