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Putative Escherichia coli LR-28 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,813,986 bp
GenBank #: AP027512
REBASE acronym: EcoLR28
Org_num: 72628
All begin VEE31_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
10100 | 197 aa hypothetical protein | |||
10110 | R | Cfr985ORF5125P (100% identity) | EcoLR28ORF10130P | |
10120 | S | S.Cfr985ORF5125P (100% identity) | S.EcoLR28ORF10130P | |
10130 | M | M.Cfr985ORF5125P (100% identity) | M.EcoLR28ORF10130P | |
10140 | 64 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3550 | cell division protein DamX | |||
??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLR28DamP |
3570 | ribulose-phosphate 3-epimerase | |||
4540 | acrEF/envCD operon transcriptional regulator | |||
4550 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoLR28ORF4550P |
4560 | DNA-binding protein Fis | |||
17900 | phosphohydrolase | |||
17910 | M | M.EcoB9S24DcmP (100% identity) | CCWGG | M.EcoLR28DcmP |
17920 | V | V.SflC32DcmP (73% identity) | V.EcoLR28DcmP | |
17930 | amino acid exporter for phenylalanine, | |||
24690 | DUF1317 domain-containing protein | |||
24700 | M | M.Eho121ORF5490P (97% identity) | M.EcoLR28ORF24700P | |
24710 | 72 aa hypothetical protein | |||
37550 | RM | EcoZ30ORF19095P (100% identity) | EcoLR28ORF37550P | |
37560 | ATP-dependent helicase | |||
37630 | 216 aa hypothetical protein | |||
37640 | R | Ecoi362ORF3874P (99% identity) | EcoLR28ORF37640P | |
37650 | 59 aa hypothetical protein | |||
37650 | 59 aa hypothetical protein | |||
??? | M | M.EcoXH993ORF23960P (100% identity) | RCCGGY | M.EcoLR28ORF37660P |
37670 | R | R2.EcoXH993ORF23960P (99% identity) | RCCGGY | EcoLR28ORF37660P |
37680 | 78 aa hypothetical protein | |||
39140 | DNA repair protein | |||
39150 | RM | M.EfeV (100% identity) | GCTAAT | EcoLR28ORF39150P |
39160 | 587 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
36970 | membrane protein | |||
36980 | R | EcoSTEFF1MrrP (99% identity) | EcoLR28MrrP | |
36990 | 58 aa hypothetical protein |