Escherichia coli LR-27 |
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Putative Escherichia coli LR-27 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,724,845 bp | AP027506 |
| plasmid pLR-27_1: | 126,139 bp | AP027507 |
REBASE acronym: EcoLR27
Org_num: 72627
All begin VEE09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18200 | 388 aa hypothetical protein | |||
| 18210 | M | M.EcoVEF10ORF18030P (98% identity) | M.EcoLR27ORF18210P | |
| 18220 | S | S1.EcoSB43ORF10515P (61% identity) | S.EcoLR27ORF18210P | |
| 18230 | 227 aa hypothetical protein | |||
| 18240 | 336 aa hypothetical protein | |||
| 18250 | R | Eco9080IP (99% identity) | EcoLR27ORF18210P | |
| 18260 | metal-dependent hydrolase | |||
| 38120 | Mrr restriction system protein | |||
| 38130 | R | EcosS142ORF37770P (100% identity) | CACNNNNNNGTTG | EcoLR27ORF38140P |
| 38140 | M | M.EcosS142ORF37770P (100% identity) | CACNNNNNNGTTG | M.EcoLR27ORF38140P |
| 38150 | S | S.EcosS142ORF37770P (100% identity) | CACNNNNNNGTTG | S.EcoLR27ORF38140P |
| 38160 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3220 | cell division protein DamX | |||
| 3230 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLR27DamP |
| 3240 | ribulose-phosphate 3-epimerase | |||
| 4380 | acrEF/envCD operon repressor | |||
| 4390 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoLR27ORF4390P |
| 4400 | DNA-binding protein Fis | |||
| 17570 | phosphohydrolase | |||
| 17580 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoLR27DcmP |
| 17590 | V | V.EcoSFE8DcmP (100% identity) | V.EcoLR27DcmP | |
| 17600 | inner membrane transporter YedA | |||
| 37580 | LexA family transcriptional regulator | |||
| 37590 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoLR27ORF37590P |
| 37600 | 58 aa hypothetical protein | |||
| plasmid pLR-27_1 | ||||
| 45160 | insertion element IS1 protein InsB | |||
| 45170 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoLR27ORF44700P |
| 45180 | transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38160 | endoribonuclease SymE | |||
| 38170 | R | EcosS142GmrSDP (100% identity) | EcoLR27GmrSDP | |
| 38180 | insertion element IS1 4 protein InsA | |||