Escherichia coli LR-24 |
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Putative Escherichia coli LR-24 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,705,498 bp
GenBank #: AP027494
REBASE acronym: EcoLR24
Org_num: 72625
All begin VEE13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4890 | 540 aa hypothetical protein | |||
| 4900 | S | S.Ecoi012ORF18325P (100% identity) | CTANNNNNNCTTC | S.EcoLR24ORF4910P |
| 4910 | M | M.EcosEC2ORF410P (100% identity) | CTANNNNNNCTTC | M.EcoLR24ORF4910P |
| 4920 | R | EcoOr019ORF22085P (100% identity) | CTANNNNNNCTTC | EcoLR24ORF4910P |
| 4930 | 104 aa hypothetical protein | |||
| 17370 | 104 aa hypothetical protein | |||
| 17380 | R | EcoOr019ORF22085P (100% identity) | TGANNNNNNCTTC | EcoLR24ORF17390P |
| 17390 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoLR24ORF17390P |
| 17400 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoLR24ORF17390P |
| 17410 | 540 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12950 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLR24DamP |
| 12970 | ribulose-phosphate 3-epimerase | |||
| 14140 | acrEF/envCD operon repressor | |||
| 14150 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoLR24ORF14150P |
| 14160 | DNA-binding protein Fis | |||
| 25740 | phage replication protein | |||
| 25750 | R | EcoKL53ORF3675P (100% identity) | TGGCCA | EcoLR24ORF25750P |
| 25760 | restriction endonuclease subunit M | |||
| 25750 | 501 aa hypothetical protein | |||
| 25760 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.EcoLR24ORF25760P |
| 25770 | phage portal vertex protein | |||
| 27020 | protein ninB | |||
| 27030 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoLR24ORF27030P |
| 27040 | protein ninX | |||
| 39430 | replication endonuclease from | |||
| 39440 | M | M.EcoPE15ORF23185P (99% identity) | GATC | M.EcoLR24ORF39440P |
| 39450 | 75 aa hypothetical protein | |||