Escherichia coli LR-03 |
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Putative Escherichia coli LR-03 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,574,716 bp | AP027474 |
| plasmid pLR-03_1: | 45,435 bp | AP027475 |
REBASE acronym: EcoLR03
Org_num: 72620
All begin VEE06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 36310 | Mrr restriction system protein | |||
| 36320 | R | EcoN61ORF38010P (100% identity) | AACNNNNNNGTGC | EcoLR03ORF36330P |
| 36330 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoLR03ORF36330P |
| 36340 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoLR03ORF36330P |
| 36350 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3240 | cell division protein DamX | |||
| 3250 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLR03DamP |
| 3260 | ribulose-phosphate 3-epimerase | |||
| 4410 | acrEF/envCD operon repressor | |||
| 4420 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoLR03ORF4420P |
| 4430 | DNA-binding protein Fis | |||
| 17090 | phosphohydrolase | |||
| 17100 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.EcoLR03DcmP |
| 17110 | V | V.EcoSCU109DcmP (100% identity) | V.EcoLR03DcmP | |
| 17120 | inner membrane transporter YedA | |||
| 33100 | ATPase | |||
| 33110 | M | M.EcoG8ORF10520P (100% identity) | M.EcoLR03ORF33110P | |
| 33120 | antitermination protein | |||
| plasmid pLR-03_1 | ||||
| 42940 | 88 aa hypothetical protein | |||
| 42950 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.EcoLR03ORF42950P |
| 42960 | R | Ubap201ORF4P (100% identity) | CCWGG | EcoLR03ORF42950P |
| 42970 | 152 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 36300 | metal-binding GTPase | |||
| 36310 | R | SenHNK130MrrP (100% identity) | EcoLR03MrrP | |
| 36320 | type I restriction enzyme EcoKI R protein | |||