Escherichia coli 15.03CC |
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Putative Escherichia coli 15.03CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,639,120 bp | AP027470 |
| plasmid p15.03CC_1: | 104,833 bp | AP027471 |
REBASE acronym: EcoCC
Org_num: 72582
All begin VEE69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p15.03CC_1 | ||||
| 44300 | 73 aa hypothetical protein | |||
| 44310 | M | M.EcoprrI (100% identity) | M.EcoCCORF44310P | |
| 44320 | S | S.EcoPE15ORF24510P (100% identity) | S.EcoCCORF44310P | |
| 44330 | R | Eco503CCORF760P (100% identity) | EcoCCORF44310P | |
| 44340 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3570 | cell division protein DamX | |||
| 3580 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCCDamP |
| 3590 | ribulose-phosphate 3-epimerase | |||
| 4740 | acrEF/envCD operon repressor | |||
| ??? | M | M.Eco1585ORF2525P (98% identity) | ATGCAT | M.EcoCCORF4750P |
| 4770 | DNA-binding protein Fis | |||
| 29030 | protein ninF | |||
| 29040 | M | M.EcoLHM101ORFIP (96% identity) | GATC | M.EcoCCORF29040P |
| 29050 | protein ninB | |||
| 33740 | 50 aa hypothetical protein | |||
| 33750 | R | Sso8033ORF3755P (99% identity) | CCWGG | EcoCCORF33760P |
| 33760 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.EcoCCORF33760P |
| 33770 | 257 aa hypothetical protein | |||
| 34120 | phage holin, lambda family protein | |||
| 34130 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoCCORF34130P | |
| 34140 | 67 aa hypothetical protein | |||
| 34200 | LexA family transcriptional regulator | |||
| 34210 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoCCORF34210P |
| 34220 | 162 aa hypothetical protein | |||
| plasmid p15.03CC_1 | ||||
| 44520 | transposase | |||
| 44530 | M | M.EcoA338ORF23540P (100% identity) | M.EcoCCORF44530P | |
| 44540 | recombination-associated protein RdgC | |||