Escherichia coli 2018-05-2CC |
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Putative Escherichia coli 2018-05-2CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,643,937 bp | AP027877 |
| plasmid p2018-05-2CC_1: | 97,315 bp | AP027878 |
REBASE acronym: Eco52CC
Org_num: 72608
All begin VEE46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18040 | 388 aa hypothetical protein | |||
| 18050 | M | M.EcoMB10ORF9000P (100% identity) | GATGNNNNNNTTG | M.Eco52CCORF18050P |
| 18060 | S | S.EcoMB10ORF9000P (100% identity) | GATGNNNNNNTTG | S.Eco52CCORF18050P |
| 18070 | 227 aa hypothetical protein | |||
| 18080 | R | EcoCP61ORF17550P (99% identity) | GATGNNNNNNTTG | Eco52CCORF18050P |
| 18090 | metal-dependent hydrolase | |||
| 25110 | transposase | |||
| 25120 | R | Sso8ORF18020P (100% identity) | Eco52CCORF25150P | |
| 25130 | 395 aa hypothetical protein | |||
| 25140 | S | S.Sso8ORF18020P (100% identity) | S.Eco52CCORF25150P | |
| 25150 | M | M.Sso8ORF18020P (100% identity) | M.Eco52CCORF25150P | |
| 25160 | 297 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3430 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco52CCDamP |
| 3450 | ribulose-phosphate 3-epimerase | |||
| 4470 | acrEF/envCD operon repressor | |||
| 4480 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco52CCORF4480P |
| 4490 | DNA-binding protein Fis | |||
| 17380 | phosphohydrolase | |||
| 17390 | M | M.SflLIN6DcmP (99% identity) | CCWGG | M.Eco52CCDcmP |
| 17400 | V | V.SflFF64DcmP (99% identity) | V.Eco52CCDcmP | |
| 17410 | inner membrane transporter YedA | |||
| plasmid p2018-05-2CC_1 | ||||
| 44410 | 63 aa hypothetical protein | |||
| 44420 | M | M.Sen0904ORF23445P (99% identity) | M.Eco52CCORF44420P | |
| 44430 | recombination-associated protein RdgC | |||