Escherichia coli 2018-02-2CC |
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Putative Escherichia coli 2018-02-2CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,574,715 bp
GenBank #: AP027873
REBASE acronym: Eco022CC
Org_num: 72607
All begin VEE78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 32360 | oxidoreductase | |||
| 32370 | R | Eco2CCORF32810P (100% identity) | Eco022CCORF32370P | |
| 32380 | S | S.EcoC1718ORF22485P (100% identity) | S.Eco022CCORF32370P | |
| 32390 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10480 | multidrug transporter | |||
| 10490 | V | V.EcoPSS16DcmP (100% identity) | V.Eco022CCDcmP | |
| 10500 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco022CCDcmP |
| 10510 | 231 aa hypothetical protein | |||
| 22270 | DNA-binding protein Fis | |||
| 22280 | M | M.EcoPSS16ORF4240P (100% identity) | ATGCAT | M.Eco022CCORF22280P |
| 22290 | acrEF/envCD operon repressor | |||
| 23430 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco022CCDamP |
| 23450 | cell division protein DamX | |||
| 30950 | ATP-dependent helicase | |||
| 30960 | RM | Eco2CCORF31360P (100% identity) | Eco022CCORF30960P | |
| 40530 | 64 aa hypothetical protein | |||
| 40540 | M | M.EcoSTEC413ORF8565P (100% identity) | M.Eco022CCORF40540P | |
| 40550 | phage holin, lambda family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32410 | restriction methylase | |||
| 32420 | R | EcoYPE3McrBP (100% identity) | Eco022CCMcrBP | |
| 32430 | R | EcoYPE3McrCP (100% identity) | Eco022CCMcrCP | |
| 32440 | restriction endonuclease | |||