Escherichia coli isolate F247 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli isolate F247 RM systems
Ref: Leclercq,S. unpublished
REBASE ref # 37790
Complete sequence: 4,939,682 bp
GenBank #: OY754407
REBASE acronym: EcoF247
Org_num: 72679
All begin FGAF247_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 27720 | IS66 family transposase ISCro1 | |||
| 27730 | R | EcoE18005IP (100% identity) | GACNNNNNTRRG | EcoF247ORF27750P |
| 27740 | S | S.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | S.EcoF247ORF27750P |
| 27750 | M | M.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | M.EcoF247ORF27750P |
| 27760 | 212 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10310 | drug/metabolite exporter YedA | |||
| 10320 | V | V.EcoS004DcmP (100% identity) | V.EcoF247DcmP | |
| 10330 | M | M.EcoS004DcmP (100% identity) | CCWGG | M.EcoF247DcmP |
| 10340 | phosphohydrolase | |||
| 23560 | DNA-binding transcriptional regulator Fis | |||
| 23570 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoF247ORF23570P |
| 23580 | DUF2556 family protein | |||
| 24630 | ribulose-phosphate 3-epimerase | |||
| 24640 | M | M.EcosEC71DamP (100% identity) | GATC | M.EcoF247DamP |
| 24650 | cell division protein DamX | |||
| 33450 | superoxide dismutase family protein | |||
| 33460 | R | SenS530DptFP (100% identity) | EcoF247DptFP | |
| 33470 | 441 aa hypothetical protein | |||
| 33460 | 549 aa hypothetical protein | |||
| 33470 | R | SenI222DptGP (100% identity) | EcoF247DptGP | |
| 33480 | 1690 aa hypothetical protein | |||
| 33470 | 441 aa hypothetical protein | |||
| 33480 | R | SenS530DptHP (100% identity) | EcoF247DptHP | |
| 33490 | DUF262 domain-containing protein | |||
| 33510 | 117 aa hypothetical protein | |||
| 33520 | M | M.SenS530DndDP (100% identity) | M.EcoF247DndDP | |
| 33530 | DNA phosphorothioation system sulfurtransferase | |||
| 33520 | DNA sulfur modification protein DndD | |||
| 33530 | M | M.SenS530DndCP (100% identity) | M.EcoF247DndCP | |
| 33540 | DNA sulfur modification protein DndB | |||
| 33530 | DNA phosphorothioation system sulfurtransferase | |||
| 33540 | M | M.SenS530DndBP (100% identity) | M.EcoF247DndBP | |
| 33550 | 104 aa hypothetical protein | |||
| 35440 | 43 aa hypothetical protein | |||
| 35450 | RM | EcosEC71ORF19770P (100% identity) | EcoF247ORF35450P | |
| 35460 | BREX system P-loop protein BrxC | |||
| 35490 | 332 aa hypothetical protein | |||
| 35500 | R | EcoPK8566ORF2340P (100% identity) | EcoF247ORF35500P | |
| 35510 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||