Escherichia coli isolate F1022 |
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Putative Escherichia coli isolate F1022 RM systems
Ref: Leclercq,S. unpublished
REBASE ref # 37790
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,988,215 bp | OY754357 |
| plasmid pF1022-1: | 194,122 bp | OY754358 |
| plasmid pF1022-2: | 191,832 bp | OY754359 |
| plasmid pF1022-4: | 112,173 bp | OY754361 |
REBASE acronym: EcoF1022
Org_num: 72672
All begin FGAF1022_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7670 | transposase domain-containing protein | |||
| 7680 | R | EcoAPEC2ORF7600P (100% identity) | EcoF1022ORF7700P | |
| 7690 | S | S.EcoAPEC2ORF7600P (100% identity) | S.EcoF1022ORF7700P | |
| 7700 | M | M.EcoAPEC2ORF7600P (100% identity) | M.EcoF1022ORF7700P | |
| 7710 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4030 | cell division protein DamX | |||
| 4040 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF1022DamP |
| 4050 | ribulose-phosphate 3-epimerase | |||
| 5490 | DUF2556 family protein | |||
| 5500 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoF1022ORF5500P |
| 5510 | DNA-binding transcriptional regulator Fis | |||
| 19370 | phosphohydrolase | |||
| 19380 | M | M.Ecos67DcmP (100% identity) | CCWGG | M.EcoF1022DcmP |
| 19390 | V | V.Ecos195DcmP (99% identity) | V.EcoF1022DcmP | |
| 19400 | drug/metabolite exporter YedA | |||
| 32300 | 273 aa hypothetical protein | |||
| 32310 | M | M.EcoO78ORF7950P (98% identity) | M.EcoF1022ORF32310P | |
| 32320 | TraR/DksA family transcriptional regulator | |||
| 41320 | sigma-54-dependent Fis family transcriptional | |||
| 41330 | R | Eco4CCORF37460P (100% identity) | EcoF1022ORF41330P | |
| 41340 | IS3 family transposase | |||
| plasmid pF1022-1 | ||||
| 48380 | 55 aa hypothetical protein | |||
| 48390 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoF1022ORF48390P |
| 48400 | thermonuclease family protein | |||
| 49140 | 48 aa hypothetical protein | |||
| 49150 | M | M.YpsF1ORFBP (100% identity) | M.EcoF1022ORF49150P | |
| 49160 | 202 aa hypothetical protein | |||
| 49380 | DNA-binding protein | |||
| 49390 | M | M.YpsF1ORFDP (95% identity) | M.EcoF1022ORF49390P | |
| 49400 | 284 aa hypothetical protein | |||
| plasmid pF1022-2 | ||||
| 50850 | conserved protein of unknown function | |||
| 50860 | M | M.Sso866ORF27155P (100% identity) | M.EcoF1022ORF50860P | |
| 50870 | 73 aa hypothetical protein | |||
| plasmid pF1022-4 | ||||
| 53630 | conserved protein of unknown function | |||
| 53640 | M | M.StyR64ORFAP (100% identity) | M.EcoF1022ORF53640P | |
| 53650 | 73 aa hypothetical protein | |||