Escherichia coli isolate F467 |
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Putative Escherichia coli isolate F467 RM systems
Ref: Leclercq,S. unpublished
REBASE ref # 37790
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,809,494 bp | OY754409 |
| plasmid pF467-4: | 3,746 bp | OY754413 |
REBASE acronym: EcoF467
Org_num: 72684
All begin FGAF467_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 39600 | DUF4942 domain-containing protein | |||
| 39610 | M | M.SflN110ORF19045P (100% identity) | M.EcoF467ORF39610P | |
| 39620 | 43 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3540 | cell division protein DamX | |||
| 3550 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF467DamP |
| 3560 | ribulose-phosphate 3-epimerase | |||
| 4750 | DUF2556 family protein | |||
| 4760 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoF467ORF4760P |
| 4770 | DNA-binding transcriptional regulator Fis | |||
| 15080 | 158 aa hypothetical protein | |||
| 15090 | M | M.CspA1ORF3316P (80% identity) | M.EcoF467ORF15090P | |
| 15100 | 72 aa hypothetical protein | |||
| 17840 | phosphohydrolase | |||
| 17850 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF467DcmP |
| 17860 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoF467DcmP |
| 17870 | drug/metabolite exporter YedA | |||
| 21840 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoF467ORF21850P | |
| 21860 | 59 aa hypothetical protein | |||
| 29360 | replication endonuclease | |||
| 29370 | M | M.Eco13SOC06ORF7565P (100% identity) | GATC | M.EcoF467ORF29370P |
| 29380 | TraR/DksA family transcriptional regulator | |||
| 39560 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 39570 | R | SflSTLE4ORF19250P (100% identity) | EcoF467ORF39570P | |
| 39580 | McrC family protein | |||
| plasmid pF467-4 | ||||
| 47840 | Rop family plasmid primer RNA-binding protein | |||
| 47850 | M | M.Eco46C19ORF23720P (100% identity) | M.EcoF467ORF47850P | |
| ??? | R | Kpn93972ORF27090P (100% identity) | EcoF467ORF47850P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 39570 | HNH endonuclease | |||
| 39580 | R | SflSTLE4McrCP (99% identity) | EcoF467McrCP | |
| 39590 | R | SflSTLE4McrBP (100% identity) | EcoF467McrBP | |
| 39600 | DUF4942 domain-containing protein | |||