Escherichia coli MS1266 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MS1266 RM systems
Ref: Jia,L. et al. unpublished
REBASE ref # 35727
| Sequence length: | GenBank #: | |
| Chromosome: | 4,735,863 bp | CP135959 |
| plasmid pAPEC-O2-MS1266-2: | 122,100 bp | CP135961 |
REBASE acronym: Eco266
Org_num: 72645
All begin RTE58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19175 | adenine/cytosine-specific restriction | |||
| 19180 | R | Eco1170ORF6990P (100% identity) | Eco266ORF19185P | |
| 19185 | M | M.Eco1170ORF6990P (100% identity) | M.Eco266ORF19185P | |
| 19190 | S | S.Eco1170ORF6990P (100% identity) | S.Eco266ORF19185P | |
| 19195 | endoribonuclease SymE | |||
| 19530 | WYL domain-containing protein | |||
| 19535 | R | Eco1170ORF7345P (100% identity) | Eco266ORF19540P | |
| 19540 | M | M.Eco1170ORF7345P (100% identity) | M.Eco266ORF19540P | |
| 19545 | S | S.Eco1170ORF7345P (100% identity) | S.Eco266ORF19540P | |
| 19550 | SIR2 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1720 | cell division protein DamX | |||
| 1725 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco266DamP |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 family protein | |||
| 2325 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco266ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 17465 | flagellar basal body P-ring formation chaperone | |||
| 17470 | M | M.EcoS7438ORFEP (99% identity) | M.Eco266ORF17470P | |
| 17475 | R | EcoSC455ORFAP (100% identity) | CCWGG | Eco266ORF17470P |
| 17480 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 19445 | HNH endonuclease | |||
| 19450 | R | EcoCU42ET1ORF3360P (100% identity) | Eco266ORF19450P | |
| 19455 | peptidase | |||
| plasmid pAPEC-O2-MS1266-2 | ||||
| 23660 | 103 aa hypothetical protein | |||
| 23665 | M | M.SspPIBORF23080P (100% identity) | M.Eco266ORF23665P | |
| 23670 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3995 | RelA/SpoT domain-containing protein | |||
| 4000 | R | Kva883ORF24390P (91% identity) | Eco266ORF4000P | |
| 4005 | TIGR03761 family integrating conjugative element | |||
| 19170 | GTPase | |||
| 19175 | R | Eco1170MrrP (100% identity) | Eco266MrrP | |
| 19180 | type I restriction-modification system | |||
| 19195 | endoribonuclease SymE | |||
| 19200 | R | Eco1170McrBP (100% identity) | Eco266McrBP | |
| 19205 | R | Eco1170McrCP (100% identity) | Eco266McrCP | |