Yersinia pseudotuberculosis Ypse1 |
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Putative Yersinia pseudotuberculosis Ypse1 RM systems
Ref: Okutani,A. et al. unpublished
REBASE ref # 37746
Complete sequence: 4,497,756 bp
GenBank #: AP028968
REBASE acronym: YpsYpse1
Org_num: 72426
All begin YPSE1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 880 | 88 aa hypothetical protein | |||
| 890 | S | S2.Yps447ORF3638P (97% identity) | S2.YpsYpse1ORF900P | |
| 900 | M | M.YpsST42ORFAP (100% identity) | M.YpsYpse1ORF900P | |
| 910 | S | S.YpsST42ORFAP (100% identity) | TGACNNNNNCTC | S1.YpsYpse1ORF900P |
| 920 | RhuM family protein | |||
| 930 | R | YpsST42ORFAP (99% identity) | YpsYpse1ORF900P | |
| 940 | SprT family zinc-dependent metalloprotease | |||
| 8740 | 238 aa hypothetical protein | |||
| 8750 | M | M.Yps581ORF5460P (90% identity) | M.YpsYpse1ORF8750P | |
| 8760 | S | S.Yps581ORF5460P (100% identity) | S.YpsYpse1ORF8750P | |
| 8770 | 395 aa hypothetical protein | |||
| 8780 | R | Yps581ORF5460P (99% identity) | YpsYpse1ORF8750P | |
| 8790 | TIGR03757 family integrating conjugative element | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2220 | SPOR domain-containing protein | |||
| ??? | M | M.Ysi228DamP (100% identity) | GATC | M.YpsYpse1DamP |
| 2240 | ribulose-phosphate 3-epimerase | |||
| 23880 | 215 aa hypothetical protein | |||
| 23890 | M | M.YpsAORF1799P (99% identity) | M.YpsYpse1ORF23890P | |
| 23900 | 291 aa hypothetical protein | |||
| 23900 | 291 aa hypothetical protein | |||
| 23910 | M | M.Ysi228ORF18130P (100% identity) | CCCGGG | M.YpsYpse1ORF23910P |
| 23920 | 115 aa hypothetical protein | |||
| 27550 | 67 aa hypothetical protein | |||
| 27560 | M | M.YpsYpse1ORF28400P (100% identity) | M.YpsYpse1ORF27560P | |
| 27570 | 45 aa hypothetical protein | |||
| 28390 | 67 aa hypothetical protein | |||
| 28400 | M | M.YpsYpse1ORF27560P (100% identity) | M.YpsYpse1ORF28400P | |
| 28410 | 76 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 940 | SprT family zinc-dependent metalloprotease | |||
| 950 | R | YpsST42MrrP (100% identity) | YpsYpse1MrrP | |
| 960 | inovirus Gp2 family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23890 | DNA cytosine methyltransferase | |||
| 23900 | M | M.Ysi228ORF18135P (100% identity) | GATC | M.YpsYpse1ORF23900P |
| 23910 | site-specific DNA-methyltransferase | |||