Escherichia coli O121 201805972 |
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Putative Escherichia coli O121 201805972 RM systems
Ref: Parsot,C. unpublished
REBASE ref # 37648
| Sequence length: | GenBank #: | |
| Chromosome: | 5,053,585 bp | CP119441 |
| plasmid pINV: | 274,029 bp | CP119442 |
REBASE acronym: Eco5972
Org_num: 72187
All begin PWR57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2525 | endoribonuclease SymE | |||
| 2530 | S | S.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | S.Eco5972ORF2535P |
| 2535 | M | M.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | M.Eco5972ORF2535P |
| 2540 | R | Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | Eco5972ORF2535P |
| 2545 | 289 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9555 | TrmB family transcriptional regulator | |||
| 9560 | M | M.EcoR64ORF25535P (98% identity) | A | M.Eco5972ORF9560P |
| 9580 | 39 aa hypothetical protein | |||
| 13790 | drug/metabolite exporter YedA | |||
| 13795 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco5972DcmP |
| 13800 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco5972DcmP |
| 13805 | phosphohydrolase | |||
| 21780 | DNA-binding transcriptional regulator Fis | |||
| 21785 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco5972ORF21785P |
| 21790 | DUF2556 family protein | |||
| plasmid pINV | ||||
| 26380 | 103 aa hypothetical protein | |||
| 26385 | M | M.SflP099ORF24190P (100% identity) | M.Eco5972ORF26385P | |
| 26390 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2510 | DUF1127 domain-containing protein | |||
| ??? | R | EcoSTEC508GmrSDP (100% identity) | Eco5972GmrSDP | |
| 2525 | endoribonuclease SymE | |||