Escherichia coli TUM1857 |
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Putative Escherichia coli TUM1857 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 5,199,107 bp | CP135709 |
| plasmid pMTY1857_IncF: | 98,339 bp | CP135710 |
REBASE acronym: Eco857
Org_num: 72193
All begin RS159_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13310 | AAA family ATPase | |||
| 13315 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco857ORF13320P |
| 13320 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco857ORF13320P |
| 13325 | R | EcoSC3IIP (100% identity) | CAAYNNNNNCTGC | Eco857ORF13320P |
| 13330 | sce7726 family protein | |||
| 17675 | endoribonuclease SymE | |||
| 17680 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco857ORF17685P |
| 17685 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco857ORF17685P |
| 17690 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco857ORF17685P |
| 17695 | 322 aa hypothetical protein | |||
| 19505 | ash family protein | |||
| 19510 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco857ORF19515P |
| 19515 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco857ORF19515P |
| 19520 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco857ORF19515P |
| 19525 | type IV toxin-antitoxin system AbiEi family | |||
| 22705 | SprT family zinc-dependent metalloprotease | |||
| 22710 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco857ORF22730P |
| 22715 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 22720 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 22725 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S1.Eco857ORF22730P |
| 22730 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco857ORF22730P |
| 22735 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3040 | 71 aa hypothetical protein | |||
| 3045 | M | M.KpnYN1ORFGP (89% identity) | M.Eco857ORF3045P | |
| 3050 | helix-turn-helix transcriptional regulator | |||
| 3735 | drug/metabolite exporter YedA | |||
| 3740 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco857DcmP |
| 3745 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco857DcmP |
| 3750 | phosphohydrolase | |||
| 11025 | DNA-binding transcriptional regulator Fis | |||
| 11030 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco857ORF11030P |
| 11035 | DUF2556 family protein | |||
| 11615 | ribulose-phosphate 3-epimerase | |||
| 11620 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco857DamP |
| 11625 | cell division protein DamX | |||
| plasmid pMTY1857_IncF | ||||
| 26050 | 73 aa hypothetical protein | |||
| 26055 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco857ORF26055P |
| 26060 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17660 | 26 aa hypothetical protein | |||
| ??? | R | Ecos137GmrSDP (100% identity) | Eco857GmrSDP | |
| 17675 | endoribonuclease SymE | |||