Escherichia coli TUM9803 |
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Putative Escherichia coli TUM9803 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 5,712,798 bp | CP135671 |
| plasmid pMTY9803_IncBOKZ: | 151,518 bp | CP135672 |
| plasmid pMTY9803_IncFII: | 72,265 bp | CP135673 |
| plasmid pMTY9803_untypable1: | 61,392 bp | CP135674 |
REBASE acronym: Eco03
Org_num: 72061
All begin RS166_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24675 | adenine/cytosine-specific restriction | |||
| 24680 | R | Ecoc20ORFEP (100% identity) | CACNNNNNNGTTG | Eco03ORF24685P |
| 24685 | M | M.EfeC10ORF18400P (97% identity) | CACNNNNNNGTTG | M.Eco03ORF24685P |
| 24690 | S | S.EcosS142ORF37770P (100% identity) | CACNNNNNNGTTG | S.Eco03ORF24685P |
| 24695 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2070 | cell division protein DamX | |||
| 2075 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco03DamP |
| 2080 | ribulose-phosphate 3-epimerase | |||
| 2685 | DUF2556 family protein | |||
| 2690 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco03ORF2690P |
| 2695 | DNA-binding transcriptional regulator Fis | |||
| 7970 | 82 aa hypothetical protein | |||
| 7975 | M | M.Eco2461ORF18385P (99% identity) | M.Eco03ORF7975P | |
| 7980 | PerC family transcriptional regulator | |||
| 8040 | eae-like domain protein | |||
| 8045 | M | M.EcoS207ORF435P (99% identity) | M.Eco03ORF8045P | |
| 8050 | ead/Ea22-like family protein | |||
| 11405 | phosphohydrolase | |||
| 11410 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco03DcmP |
| 11415 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco03DcmP |
| 11420 | drug/metabolite exporter YedA | |||
| 19265 | replication endonuclease | |||
| 19270 | M | M.EcoPEC0001ORF980P (100% identity) | GATC | M.Eco03ORF19270P |
| 19275 | TraR/DksA family transcriptional regulator | |||
| 20920 | NinE family protein | |||
| 20925 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco03ORF20925P |
| 20930 | recombination protein NinB | |||
| 20955 | DUF1317 family protein | |||
| 20960 | M | M.EcoTL14ORF18050P (100% identity) | M.Eco03ORF20960P | |
| 20965 | cell division protein ZapA | |||
| 21465 | ogr/Delta-like zinc finger family protein | |||
| 21470 | M | M.Eco21ORF11580P (97% identity) | M.Eco03ORF21470P | |
| 21475 | copper-exporting P-type ATPase CopA | |||
| 22695 | NinE family protein | |||
| 22700 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco03ORF22700P |
| 22705 | recombination protein NinB | |||
| plasmid pMTY9803_IncBOKZ | ||||
| 29225 | 103 aa hypothetical protein | |||
| 29230 | M | M.Sen6022ORF69P (100% identity) | M.Eco03ORF29230P | |
| 29235 | 73 aa hypothetical protein | |||
| plasmid pMTY9803_IncFII | ||||
| 29755 | 97 aa hypothetical protein | |||
| 29760 | M | M.Ssop356ORFAP (100% identity) | M.Eco03ORF29760P | |
| 29765 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMTY9803_untypable1 | ||||
| 30175 | maturation control protein | |||
| 30180 | R | SenSL0052ORF25975P (100% identity) | AGACC | Eco03ORF30185P |
| 30185 | M | M.SenSL0052ORF25975P (99% identity) | AGACC | M.Eco03ORF30185P |
| 30190 | modulator protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24670 | GTPase | |||
| 24675 | R | SenHNK130MrrP (100% identity) | Eco03MrrP | |
| 24680 | type I restriction-modification system | |||
| 24695 | endoribonuclease SymE | |||
| 24700 | R | EcosS142GmrSDP (55% identity) | Eco03GmrSDBP | |
| 24705 | R | EcosS142GmrSDP (42% identity) | Eco03GmrSDAP | |
| 24710 | 15 aa hypothetical protein | |||