Escherichia coli TUM9975 |
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Putative Escherichia coli TUM9975 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 5,113,034 bp | CP135664 |
| plasmid pMTY9975_IncF: | 37,040 bp | CP135668 |
| plasmid pMTY9975_IncFII: | 76,366 bp | CP135667 |
| plasmid pMTY9975_IncI: | 94,265 bp | CP135666 |
| plasmid pMTY9975_untypable1: | 97,430 bp | CP135665 |
REBASE acronym: Eco975
Org_num: 72062
All begin RS167_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2850 | endoribonuclease SymE | |||
| 2855 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco975ORF2865P |
| 2860 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco975ORF2865P |
| 2865 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco975ORF2865P |
| 2870 | restriction endonuclease | |||
| 4920 | ash family protein | |||
| 4925 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco975ORF4930P |
| 4930 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco975ORF4930P |
| 4935 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco975ORF4930P |
| 4940 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2495 | helix-turn-helix domain-containing protein | |||
| 2500 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco975ORF2500P |
| 2505 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco975ORF2500P |
| 2510 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco975ORF2500P |
| 2515 | McrC family protein | |||
| 3070 | PerC family transcriptional regulator | |||
| 3075 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco975ORF3075P |
| 3080 | LexA family transcriptional regulator | |||
| 3110 | 67 aa hypothetical protein | |||
| 3115 | M | M.Sso63633ORF22290P (100% identity) | M.Eco975ORF3115P | |
| 3120 | phage lysis protein EssD | |||
| 8425 | 71 aa hypothetical protein | |||
| 8430 | M | M.KpnYN1ORFGP (89% identity) | M.Eco975ORF8430P | |
| 8435 | helix-turn-helix transcriptional regulator | |||
| 10705 | TrmB family transcriptional regulator | |||
| 10710 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco975ORF10710P |
| 10725 | DUF3927 family protein | |||
| 14235 | drug/metabolite exporter YedA | |||
| 14240 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco975DcmP |
| 14245 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco975DcmP |
| 14250 | phosphohydrolase | |||
| 17370 | PerC family transcriptional regulator | |||
| 17375 | M | M.EcoWP4ORF12630P (98% identity) | M.Eco975ORF17375P | |
| 17380 | DUF1382 family protein | |||
| 21720 | DNA-binding transcriptional regulator Fis | |||
| 21725 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco975ORF21725P |
| 21730 | DUF2556 family protein | |||
| plasmid pMTY9975_IncF | ||||
| 26940 | 73 aa hypothetical protein | |||
| 26945 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco975ORF26945P |
| 26950 | 103 aa hypothetical protein | |||
| plasmid pMTY9975_IncFII | ||||
| 26460 | 24 aa hypothetical protein | |||
| 26465 | M | M.Xca80ORFEP (100% identity) | M.Eco975ORF26465P | |
| 26470 | 73 aa hypothetical protein | |||
| plasmid pMTY9975_IncI | ||||
| 25905 | 24 aa hypothetical protein | |||
| 25910 | M | M.SflN101ORF24625P (100% identity) | M.Eco975ORF25910P | |
| 25915 | 73 aa hypothetical protein | |||
| plasmid pMTY9975_untypable1 | ||||
| 25325 | recombination-associated protein RdgC | |||
| 25330 | M | M.Eco747ORF29440P (99% identity) | M.Eco975ORF25330P | |
| 25345 | TerB family tellurite resistance protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2510 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 2515 | R | EcosS9McrCP (100% identity) | Eco975McrCP | |
| 2520 | R | EcosS3McrBP (100% identity) | Eco975McrBP | |
| 2525 | glycosyltransferase family 2 protein | |||
| 2865 | class I SAM-dependent DNA methyltransferase | |||
| 2870 | R | Ecou021MrrP (100% identity) | Eco975MrrP | |
| 2875 | BrnT family toxin | |||