Escherichia coli TUM3755 |
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Putative Escherichia coli TUM3755 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 4,896,746 bp | CP135680 |
| plasmid pMTY3755_IncFII: | 103,178 bp | CP135683 |
REBASE acronym: Eco755
Org_num: 72060
All begin RS165_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2725 | endoribonuclease SymE | |||
| 2730 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.Eco755ORF2735P |
| 2735 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.Eco755ORF2735P |
| 2740 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | Eco755ORF2735P |
| 2745 | adenine/cytosine-specific restriction | |||
| 19665 | IS3 family transposase | |||
| 19670 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco755ORF19685P |
| 19675 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco755ORF19685P |
| 19680 | AAA family ATPase | |||
| 19685 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco755ORF19685P |
| 19690 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 940 | 28 aa hypothetical protein | |||
| 945 | M | M.EcoE2aORF950P (100% identity) | GATC | M.Eco755ORF945P |
| 950 | RusA family crossover junction | |||
| 3900 | NinE family protein | |||
| 3905 | M | M.EcoPEC0001ORF4630P (100% identity) | GATC | M.Eco755ORF3905P |
| 3910 | recombination protein NinB | |||
| 7580 | TraR/DksA family transcriptional regulator | |||
| 7585 | M | M.EcoPEC0001ORF980P (100% identity) | GATC | M.Eco755ORF7585P |
| 7590 | replication endonuclease | |||
| 11325 | 60 aa hypothetical protein | |||
| 11330 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco755ORF11330P | |
| 11335 | IS3 family transposase | |||
| 13285 | drug/metabolite exporter YedA | |||
| 13290 | V | V.EcosPA11DcmP (100% identity) | V.Eco755DcmP | |
| 13295 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.Eco755DcmP |
| 13300 | phosphohydrolase | |||
| 20890 | DNA-binding transcriptional regulator Fis | |||
| 20895 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco755ORF20895P |
| 20900 | DUF2556 family protein | |||
| 21515 | ribulose-phosphate 3-epimerase | |||
| 21520 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco755DamP |
| 21525 | cell division protein DamX | |||
| plasmid pMTY3755_IncFII | ||||
| 25805 | 103 aa hypothetical protein | |||
| 25810 | M | M.EcoE2aORF26760P (100% identity) | SAY | M.Eco755ORF25810P |
| 25815 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2740 | type I restriction-modification system | |||
| 2745 | R | Ssp28760MrrP (100% identity) | Eco755MrrP | |
| 2750 | GTPase | |||
| 9200 | tail fiber assembly protein | |||
| 9205 | R | Ecos15955McrBP (100% identity) | Eco755McrBP | |
| 9210 | R | Ecos15955McrCP (95% identity) | Eco755McrCP | |
| 9215 | isocitrate/isopropylmalate family dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14160 | NinE family protein | |||
| 14165 | M | M.SflN97ORF8425P (98% identity) | GATC | M.Eco755ORF14165P |
| 14170 | recombination protein NinB | |||