Escherichia coli TUM2367 |
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Putative Escherichia coli TUM2367 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 5,023,218 bp | CP135697 |
| plasmid pMTY2367_IncBOKZ: | 104,860 bp | CP135699 |
| plasmid pMTY2367_IncF: | 160,742 bp | CP135698 |
| plasmid pMTY2367_IncFII: | 60,932 bp | CP135700 |
REBASE acronym: Eco367
Org_num: 72056
All begin RS161_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16925 | endoribonuclease SymE | |||
| 16930 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco367ORF16940P |
| 16935 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco367ORF16940P |
| 16940 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco367ORF16940P |
| 16945 | restriction endonuclease | |||
| 18730 | ash family protein | |||
| 18735 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco367ORF18740P |
| 18740 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco367ORF18740P |
| 18745 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco367ORF18740P |
| 18750 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pMTY2367_IncF | ||||
| 25455 | IS1-like element IS1A family transposase | |||
| 25460 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco367ORF25470P |
| 25465 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S1.Eco367ORF25470P |
| 25470 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco367ORF25470P |
| 25475 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3475 | drug/metabolite exporter YedA | |||
| 3480 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco367DcmP |
| 3485 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco367DcmP |
| 3490 | phosphohydrolase | |||
| 10600 | DNA-binding transcriptional regulator Fis | |||
| 10605 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco367ORF10605P |
| 10610 | DUF2556 family protein | |||
| 11200 | ribulose-phosphate 3-epimerase | |||
| 11205 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco367DamP |
| 11210 | cell division protein DamX | |||
| 12890 | 73 aa hypothetical protein | |||
| 12895 | M | M.Sso80ORF24890P (100% identity) | M.Eco367ORF12895P | |
| 12900 | 103 aa hypothetical protein | |||
| 16555 | helix-turn-helix domain-containing protein | |||
| 16560 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco367ORF16560P |
| 16565 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco367ORF16560P |
| 16570 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco367ORF16560P |
| 16575 | McrC family protein | |||
| 22230 | 134 aa hypothetical protein | |||
| 22235 | M | M.KpnYN1ORFGP (89% identity) | M.Eco367ORF22235P | |
| 22240 | helix-turn-helix transcriptional regulator | |||
| plasmid pMTY2367_IncBOKZ | ||||
| 25715 | 103 aa hypothetical protein | |||
| 25720 | M | M.Sso80ORF24890P (100% identity) | M.Eco367ORF25720P | |
| 25725 | 73 aa hypothetical protein | |||
| plasmid pMTY2367_IncF | ||||
| 25385 | 73 aa hypothetical protein | |||
| 25390 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco367ORF25390P |
| 25395 | 103 aa hypothetical protein | |||
| plasmid pMTY2367_IncFII | ||||
| 26190 | 103 aa hypothetical protein | |||
| 26195 | M | M.Sen143ORF26480P (100% identity) | M.Eco367ORF26195P | |
| 26200 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16570 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16575 | R | EcosS9McrCP (100% identity) | Eco367McrCP | |
| 16580 | R | EcosS3McrBP (100% identity) | Eco367McrBP | |
| 16585 | glycosyltransferase family 2 protein | |||
| 16940 | class I SAM-dependent DNA methyltransferase | |||
| 16945 | R | Ecou021MrrP (100% identity) | Eco367MrrP | |
| 16950 | BrnT family toxin | |||