Escherichia coli TUM10008 |
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Putative Escherichia coli TUM10008 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 4,897,043 bp | CP135658 |
| plasmid pMTY10008_IncBOKZ: | 87,747 bp | CP135660 |
| plasmid pMTY10008_IncF: | 229,583 bp | CP135659 |
REBASE acronym: Eco10008
Org_num: 72050
All begin RS168_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17325 | endoribonuclease SymE | |||
| 17330 | R | Eco34C24ORF18310P (99% identity) | Eco10008ORF17340P | |
| 17335 | S | S.Esp9308ORFIP (63% identity) | S.Eco10008ORF17340P | |
| 17340 | M | M.EcoPI12ORF19135P (100% identity) | M.Eco10008ORF17340P | |
| 17345 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4225 | drug/metabolite exporter YedA | |||
| 4230 | V | V.Ecos195DcmP (100% identity) | V.Eco10008DcmP | |
| 4235 | M | M.Ecos67DcmP (100% identity) | CCWGG | M.Eco10008DcmP |
| 4240 | phosphohydrolase | |||
| 6385 | Com family DNA-binding transcriptional | |||
| 6390 | M | M.Efe65411ORF7205P (100% identity) | M.Eco10008ORF6390P | |
| 6395 | flagella biosynthesis regulator Flk | |||
| 11105 | DNA-binding transcriptional regulator Fis | |||
| 11110 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco10008ORF11110P |
| 11115 | DUF2556 family protein | |||
| 11730 | ribulose-phosphate 3-epimerase | |||
| 11735 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco10008DamP |
| 11740 | cell division protein DamX | |||
| 19090 | 257 aa hypothetical protein | |||
| 19095 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco10008ORF19095P |
| 19100 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco10008ORF19095P |
| 19105 | 158 aa hypothetical protein | |||
| plasmid pMTY10008_IncBOKZ | ||||
| 25845 | 101 aa hypothetical protein | |||
| 25850 | M | M.SsoST152ORF25555P (100% identity) | M.Eco10008ORF25850P | |
| 25855 | 73 aa hypothetical protein | |||
| plasmid pMTY10008_IncF | ||||
| 25190 | 73 aa hypothetical protein | |||
| 25195 | M | M.Kpn121ORF28445P (100% identity) | M.Eco10008ORF25195P | |
| 25200 | 103 aa hypothetical protein | |||
| 25635 | 73 aa hypothetical protein | |||
| 25640 | M | M.SflN92ORF24820P (100% identity) | M.Eco10008ORF25640P | |
| 25645 | 78 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17340 | class I SAM-dependent DNA methyltransferase | |||
| 17345 | R | EcoPI12MrrP (100% identity) | Eco10008MrrP | |
| 17350 | BrnT family toxin | |||