Escherichia coli Escherichia coli EC12401 |
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Putative Escherichia coli Escherichia coli EC12401 RM systems
Ref: Peirano,G. and Pitout,J. unpublished
REBASE ref # 37602
| Sequence length: | GenBank #: | |
| Chromosome: | 5,117,098 bp | CP135215 |
| plasmid pEC12401-1: | 65,097 bp | CP135214 |
| plasmid pEC12401-2: | 51,361 bp | CP135213 |
REBASE acronym: Eco2401
Org_num: 72043
All begin RRI68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14515 | AAA family ATPase | |||
| 14520 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco2401ORF14525P |
| 14525 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco2401ORF14525P |
| 14530 | R | EcoSC3IIP (100% identity) | CAAYNNNNNCTGC | Eco2401ORF14525P |
| 14535 | sce7726 family protein | |||
| 19005 | endoribonuclease SymE | |||
| 19010 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco2401ORF19015P |
| 19015 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco2401ORF19015P |
| 19020 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco2401ORF19015P |
| 19025 | 322 aa hypothetical protein | |||
| 20875 | ash family protein | |||
| 20880 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco2401ORF20885P |
| 20885 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco2401ORF20885P |
| 20890 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco2401ORF20885P |
| 20895 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4095 | 71 aa hypothetical protein | |||
| 4100 | M | M.KpnYN1ORFGP (89% identity) | M.Eco2401ORF4100P | |
| 4105 | helix-turn-helix transcriptional regulator | |||
| 4790 | drug/metabolite exporter YedA | |||
| 4795 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco2401DcmP |
| 4800 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco2401DcmP |
| 4805 | phosphohydrolase | |||
| 12260 | DNA-binding transcriptional regulator Fis | |||
| 12265 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco2401ORF12265P |
| 12270 | DUF2556 family protein | |||
| 12860 | ribulose-phosphate 3-epimerase | |||
| 12865 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2401DamP |
| 12870 | cell division protein DamX | |||
| 26175 | TrmB family transcriptional regulator | |||
| 26180 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco2401ORF26180P |
| 26195 | DUF3927 family protein | |||
| plasmid pEC12401-1 | ||||
| 690 | 97 aa hypothetical protein | |||
| 695 | M | M.Xca80ORFEP (100% identity) | M.Eco2401ORF695P | |
| 700 | 73 aa hypothetical protein | |||
| plasmid pEC12401-2 | ||||
| 540 | 73 aa hypothetical protein | |||
| 545 | M | M.Sso3885ORF23215P (100% identity) | SAY | M.Eco2401ORF545P |
| 550 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18990 | 26 aa hypothetical protein | |||
| ??? | R | Ecos137GmrSDP (100% identity) | Eco2401GmrSDP | |
| 19005 | endoribonuclease SymE | |||